STRINGSTRING
ABK72823.1 ABK72823.1 ABK70870.1 ABK70870.1 ABK69944.1 ABK69944.1 ABK74100.1 ABK74100.1 accD accD ABK75426.1 ABK75426.1 ABK73362.1 ABK73362.1 ABK75886.1 ABK75886.1 ABK69571.1 ABK69571.1 ABK71104.1 ABK71104.1 mce mce
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72823.1Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF01071; match to protein family HMM PF02785; match to protein family HMM PF02786. (669 aa)    
Predicted Functional Partners:
ABK70870.1
Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039.
 0.991
ABK69944.1
Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039.
 0.984
ABK74100.1
propionyl-CoA carboxylase beta chain; Identified by match to protein family HMM PF01039.
 
 0.983
accD
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Identified by match to protein family HMM PF01039.
 0.983
ABK75426.1
propionyl-CoA carboxylase beta chain; Identified by match to protein family HMM PF01039.
 
 0.982
ABK73362.1
methylmalonyl-CoA carboxyltransferase 12S subunit; Identified by match to protein family HMM PF01039.
 
 0.980
ABK75886.1
acetyl-CoA carboxylase carboxyltransferase; Identified by match to protein family HMM PF01039.
 0.963
ABK69571.1
Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039.
 0.944
ABK71104.1
Urea amidolyase; Identified by match to protein family HMM PF02626; match to protein family HMM PF02682; match to protein family HMM TIGR00724.
 
  
 0.941
mce
methylmalonyl-CoA epimerase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03081.
  
 
 0.941
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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