STRINGSTRING
ABK72335.1 ABK72335.1 ABK74217.1 ABK74217.1 ABK73028.1 ABK73028.1 ABK75309.1 ABK75309.1 ABK73074.1 ABK73074.1 ABK71990.1 ABK71990.1 ABK70545.1 ABK70545.1 ABK70883.1 ABK70883.1 ABK75111.1 ABK75111.1 ABK75809.1 ABK75809.1 ABK75818.1 ABK75818.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72335.1Virulence factor; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996. (474 aa)    
Predicted Functional Partners:
ABK74217.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02405.
 
 
 0.969
ABK73028.1
Mce-family protein mce3c; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
  
 0.956
ABK75309.1
Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
  
 0.955
ABK73074.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02405.
 
 
 0.954
ABK71990.1
Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
  
 0.952
ABK70545.1
Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
  
 0.952
ABK70883.1
Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
  
 0.943
ABK75111.1
Conserved hypothetical protein.
 
  
 0.919
ABK75809.1
Conserved hypothetical protein.
 
  
 0.885
ABK75818.1
Mce-family protein mce1f; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
  
 0.876
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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