Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70609.1 | ABK74272.1 | MSMEG_4618 | MSMEG_0218 | Identified by match to protein family HMM PF00857. | 3-demethylubiquinone-9 3-methyltransferase; Identified by match to protein family HMM PF06983. | 0.433 |
| ABK70609.1 | ABK74887.1 | MSMEG_4618 | MSMEG_0356 | Identified by match to protein family HMM PF00857. | Acetyltransferase. | 0.447 |
| ABK70609.1 | ABK75738.1 | MSMEG_4618 | MSMEG_3083 | Identified by match to protein family HMM PF00857. | Nucleoside-diphosphate sugar epimerase; Identified by match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01777. | 0.447 |
| ABK70749.1 | ABK74143.1 | MSMEG_6786 | MSMEG_5219 | Conserved hypothetical protein. | Riboflavin biosynthesis protein RibD C- domain protein; Identified by match to protein family HMM PF01872. | 0.442 |
| ABK70749.1 | ABK74887.1 | MSMEG_6786 | MSMEG_0356 | Conserved hypothetical protein. | Acetyltransferase. | 0.440 |
| ABK71151.1 | ABK74887.1 | MSMEG_0357 | MSMEG_0356 | Transmembrane transport protein; Identified by match to protein family HMM PF05977; match to protein family HMM PF07690. | Acetyltransferase. | 0.564 |
| ABK71151.1 | nrdB | MSMEG_0357 | MSMEG_0358 | Transmembrane transport protein; Identified by match to protein family HMM PF05977; match to protein family HMM PF07690. | Ribonucleoside-diphosphate reductase, beta subunit; Probable oxidase that might be involved in lipid metabolism. Belongs to the ribonucleoside diphosphate reductase small chain family. R2-like ligand binding oxidase subfamily. | 0.675 |
| ABK71361.1 | ABK74272.1 | MSMEG_4284 | MSMEG_0218 | Conserved hypothetical protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM TIGR01777. | 3-demethylubiquinone-9 3-methyltransferase; Identified by match to protein family HMM PF06983. | 0.499 |
| ABK71361.1 | ABK74867.1 | MSMEG_4284 | MSMEG_3330 | Conserved hypothetical protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM TIGR01777. | Conserved domain protein; Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family. | 0.447 |
| ABK71361.1 | ABK74887.1 | MSMEG_4284 | MSMEG_0356 | Conserved hypothetical protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM TIGR01777. | Acetyltransferase. | 0.474 |
| ABK74143.1 | ABK70749.1 | MSMEG_5219 | MSMEG_6786 | Riboflavin biosynthesis protein RibD C- domain protein; Identified by match to protein family HMM PF01872. | Conserved hypothetical protein. | 0.442 |
| ABK74143.1 | ABK74887.1 | MSMEG_5219 | MSMEG_0356 | Riboflavin biosynthesis protein RibD C- domain protein; Identified by match to protein family HMM PF01872. | Acetyltransferase. | 0.447 |
| ABK74272.1 | ABK70609.1 | MSMEG_0218 | MSMEG_4618 | 3-demethylubiquinone-9 3-methyltransferase; Identified by match to protein family HMM PF06983. | Identified by match to protein family HMM PF00857. | 0.433 |
| ABK74272.1 | ABK71361.1 | MSMEG_0218 | MSMEG_4284 | 3-demethylubiquinone-9 3-methyltransferase; Identified by match to protein family HMM PF06983. | Conserved hypothetical protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM TIGR01777. | 0.499 |
| ABK74272.1 | ABK74887.1 | MSMEG_0218 | MSMEG_0356 | 3-demethylubiquinone-9 3-methyltransferase; Identified by match to protein family HMM PF06983. | Acetyltransferase. | 0.501 |
| ABK74272.1 | ABK75738.1 | MSMEG_0218 | MSMEG_3083 | 3-demethylubiquinone-9 3-methyltransferase; Identified by match to protein family HMM PF06983. | Nucleoside-diphosphate sugar epimerase; Identified by match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01777. | 0.508 |
| ABK74867.1 | ABK71361.1 | MSMEG_3330 | MSMEG_4284 | Conserved domain protein; Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family. | Conserved hypothetical protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM TIGR01777. | 0.447 |
| ABK74867.1 | ABK74887.1 | MSMEG_3330 | MSMEG_0356 | Conserved domain protein; Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family. | Acetyltransferase. | 0.586 |
| ABK74867.1 | ABK75738.1 | MSMEG_3330 | MSMEG_3083 | Conserved domain protein; Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family. | Nucleoside-diphosphate sugar epimerase; Identified by match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01777. | 0.447 |
| ABK74887.1 | ABK70609.1 | MSMEG_0356 | MSMEG_4618 | Acetyltransferase. | Identified by match to protein family HMM PF00857. | 0.447 |
page 1 of 2