Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69655.1 | ABK76030.1 | MSMEG_0363 | MSMEG_0362 | Identified by match to protein family HMM PF00440. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.562 |
| ABK73302.1 | ABK76030.1 | MSMEG_3563 | MSMEG_0362 | Drug transporter; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.558 |
| ABK73302.1 | bfr | MSMEG_3563 | MSMEG_3564 | Drug transporter; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.769 |
| ABK73302.1 | glnA | MSMEG_3563 | MSMEG_3561 | Drug transporter; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. | Glutamine synthetase, catalytic domain; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | 0.773 |
| ABK73302.1 | pcaC-4 | MSMEG_3563 | MSMEG_3562 | Drug transporter; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. | 4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627. | 0.755 |
| ABK73325.1 | ABK76030.1 | MSMEG_1127 | MSMEG_0362 | Probable conserved transmembrane protein. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.442 |
| ABK73584.1 | ABK76030.1 | MSMEG_3638 | MSMEG_0362 | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.462 |
| ABK75823.1 | ABK76030.1 | MSMEG_3827 | MSMEG_0362 | Glutamine synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.567 |
| ABK76030.1 | ABK69655.1 | MSMEG_0362 | MSMEG_0363 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Identified by match to protein family HMM PF00440. | 0.562 |
| ABK76030.1 | ABK73302.1 | MSMEG_0362 | MSMEG_3563 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Drug transporter; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. | 0.558 |
| ABK76030.1 | ABK73325.1 | MSMEG_0362 | MSMEG_1127 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Probable conserved transmembrane protein. | 0.442 |
| ABK76030.1 | ABK73584.1 | MSMEG_0362 | MSMEG_3638 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595. | 0.462 |
| ABK76030.1 | ABK75823.1 | MSMEG_0362 | MSMEG_3827 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Glutamine synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | 0.567 |
| ABK76030.1 | bfr | MSMEG_0362 | MSMEG_3564 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.572 |
| ABK76030.1 | glnA | MSMEG_0362 | MSMEG_3561 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Glutamine synthetase, catalytic domain; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | 0.975 |
| ABK76030.1 | glnA-3 | MSMEG_0362 | MSMEG_4294 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Glutamine synthetase, type I; Glutamine synthetase (GS) is an unusual multitasking protein that functions as an enzyme, a transcription coregulator, and a chaperone in ammonium assimilation and in the regulation of genes involved in nitrogen metabolism. It catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia. Feedback- inhibited GlnA also interacts with and regulates the activity of the transcriptional regulator TnrA. During nitrogen limitation, TnrA is in its DNA-binding active state and turns on the transcription of genes required for nitrogen assimilation [...] | 0.828 |
| ABK76030.1 | glnT | MSMEG_0362 | MSMEG_6260 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Glutamine synthetase, type III; Identified by match to protein family HMM PF00120; match to protein family HMM TIGR03105; Belongs to the glutamine synthetase family. | 0.455 |
| ABK76030.1 | pcaC-4 | MSMEG_0362 | MSMEG_3562 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627. | 0.559 |
| bfr | ABK73302.1 | MSMEG_3564 | MSMEG_3563 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Drug transporter; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. | 0.769 |
| bfr | ABK76030.1 | MSMEG_3564 | MSMEG_0362 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.572 |
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