STRINGSTRING
ABK76126.1 ABK76126.1 ABK72581.1 ABK72581.1 ABK70333.1 ABK70333.1 ABK71227.1 ABK71227.1 smc smc dapB-2 dapB-2 ABK73981.1 ABK73981.1 ABK72110.1 ABK72110.1 ABK73573.1 ABK73573.1 ABK69846.1 ABK69846.1 stf0 stf0
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76126.1Conserved hypothetical protein. (1118 aa)    
Predicted Functional Partners:
ABK72581.1
Hypothetical protein; Identified by Glimmer2; putative.
 
   0.985
ABK70333.1
Hypothetical protein; Identified by Glimmer2; putative.
 
   0.970
ABK71227.1
Conserved hypothetical protein.
 
   0.895
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
  
 0.822
dapB-2
Dihydrodipicolinate reductase, N-terminus domain protein; Identified by match to protein family HMM PF01113.
  
     0.627
ABK73981.1
Conserved hypothetical protein.
  
     0.586
ABK72110.1
Conserved hypothetical protein.
  
     0.585
ABK73573.1
Translation elongation factor EF-G; Identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231.
      
 0.583
ABK69846.1
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.560
stf0
Conserved hypothetical protein; Catalyzes the sulfuryl group transfer from 3'- phosphoadenosine-5'-phosphosulfate (PAPS) to trehalose, leading to trehalose-2-sulfate (T2S). The sulfation of trehalose is the first step in the biosynthesis of sulfolipid-1 (SL-1), a major cell wall glycolipid in pathogenic mycobacteria. Cannot use free glucose and unnatural stereoisomers of trehalose (alpha,beta (neo-trehalose) and beta,beta (iso-trehalose)) as substrates.
  
     0.553
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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