STRINGSTRING
mmpl4a mmpl4a mmpS4 mmpS4 mmpL4b mmpL4b gtf1 gtf1 ABK73949.1 ABK73949.1 snm snm ABK71982.1 ABK71982.1 eccB3 eccB3 rfbA rfbA ABK75432.1 ABK75432.1 ABK75153.1 ABK75153.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmpl4aMmp14a protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833. (960 aa)    
Predicted Functional Partners:
mmpS4
MmpS4 protein; Identified by match to protein family HMM PF05423.
  
  
 0.960
mmpL4b
Putative transport protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833.
 
  
0.776
gtf1
Putative glycosyl transferase; Identified by match to protein family HMM PF03033.
  
  
 0.754
ABK73949.1
Conserved hypothetical protein.
  
    0.686
snm
Secretion protein Snm4; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG; Belongs to the EccD/Snm4 family.
  
     0.681
ABK71982.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026.
  
    0.634
eccB3
Conserved hypothetical protein; An ATPase (By similarity). Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG.
 
   0.628
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Involved in the biosynthesis of the dTDP-L-rhamnose which is a component of the critical linker, D-N-acetylglucosamine-L-rhamnose disaccharide, which connects the galactan region of arabinogalactan to peptidoglycan via a phosphodiester linkage; Belongs to the glucose-1-phosphate thymidylyltransferase family.
   
  
 0.621
ABK75432.1
Putative acyltransferase; Identified by match to protein family HMM PF01757.
 
  
 0.608
ABK75153.1
Conserved hypothetical protein.
  
    0.602
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.