STRINGSTRING
ABK71089.1 ABK71089.1 ABK73314.1 ABK73314.1 ABK73350.1 ABK73350.1 ABK72522.1 ABK72522.1 pks pks ABK72554.1 ABK72554.1 stf0 stf0 ABK70957.1 ABK70957.1 ABK71204.1 ABK71204.1 pks5 pks5 ABK71734.1 ABK71734.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ABK71089.1Putative glycosyl transferase; Identified by match to protein family HMM PF03033. (418 aa)    
Predicted Functional Partners:
ABK73314.1
Condensation domain protein; Identified by match to protein family HMM PF00668.
 
    0.738
ABK73350.1
Condensation domain protein; Identified by match to protein family HMM PF00668.
 
  
 0.699
ABK72522.1
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993.
 
  
 0.681
pks
Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801.
 
  
 0.664
ABK72554.1
Conserved hypothetical protein.
  
    0.593
stf0
Conserved hypothetical protein; Catalyzes the sulfuryl group transfer from 3'- phosphoadenosine-5'-phosphosulfate (PAPS) to trehalose, leading to trehalose-2-sulfate (T2S). The sulfation of trehalose is the first step in the biosynthesis of sulfolipid-1 (SL-1), a major cell wall glycolipid in pathogenic mycobacteria. Cannot use free glucose and unnatural stereoisomers of trehalose (alpha,beta (neo-trehalose) and beta,beta (iso-trehalose)) as substrates.
  
    0.593
ABK70957.1
Conserved hypothetical protein.
 
    0.556
ABK71204.1
Rmt3 protein.
 
  
 0.539
pks5
Mycocerosic acid synthase; Polyketide synthase involved in the biosynthesis of 2,4- dimethyl-2-eicosenoic acid, a lipid component of the lipooligosaccharides (LOS) which are not located at the bacterial surface but rather in deeper compartments of the cell envelope of M.smegmatis.
 
  
 0.516
ABK71734.1
Rmt2 protein.
 
   
 0.484
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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