Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69805.1 | ABK72257.1 | MSMEG_0414 | MSMEG_0413 | Oxidoreductase, 2OG-Fe(II) oxygenase family protein; Identified by match to protein family HMM PF03171; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Conserved hypothetical protein. | 0.576 |
ABK69805.1 | ABK74461.1 | MSMEG_0414 | MSMEG_5809 | Oxidoreductase, 2OG-Fe(II) oxygenase family protein; Identified by match to protein family HMM PF03171; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Lipoprotein YaeC, putative; Identified by match to protein family HMM PF03180. | 0.458 |
ABK69805.1 | ABK75020.1 | MSMEG_0414 | MSMEG_0415 | Oxidoreductase, 2OG-Fe(II) oxygenase family protein; Identified by match to protein family HMM PF03171; Belongs to the iron/ascorbate-dependent oxidoreductase family. | NADH-fmn oxidoreductase; Identified by match to protein family HMM PF01613. | 0.770 |
ABK69805.1 | ABK75302.1 | MSMEG_0414 | MSMEG_3058 | Oxidoreductase, 2OG-Fe(II) oxygenase family protein; Identified by match to protein family HMM PF03171; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family. | 0.453 |
ABK72257.1 | ABK69805.1 | MSMEG_0413 | MSMEG_0414 | Conserved hypothetical protein. | Oxidoreductase, 2OG-Fe(II) oxygenase family protein; Identified by match to protein family HMM PF03171; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.576 |
ABK72257.1 | ABK75020.1 | MSMEG_0413 | MSMEG_0415 | Conserved hypothetical protein. | NADH-fmn oxidoreductase; Identified by match to protein family HMM PF01613. | 0.575 |
ABK74461.1 | ABK69805.1 | MSMEG_5809 | MSMEG_0414 | Lipoprotein YaeC, putative; Identified by match to protein family HMM PF03180. | Oxidoreductase, 2OG-Fe(II) oxygenase family protein; Identified by match to protein family HMM PF03171; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.458 |
ABK75020.1 | ABK69805.1 | MSMEG_0415 | MSMEG_0414 | NADH-fmn oxidoreductase; Identified by match to protein family HMM PF01613. | Oxidoreductase, 2OG-Fe(II) oxygenase family protein; Identified by match to protein family HMM PF03171; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.770 |
ABK75020.1 | ABK72257.1 | MSMEG_0415 | MSMEG_0413 | NADH-fmn oxidoreductase; Identified by match to protein family HMM PF01613. | Conserved hypothetical protein. | 0.575 |
ABK75302.1 | ABK69805.1 | MSMEG_3058 | MSMEG_0414 | Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family. | Oxidoreductase, 2OG-Fe(II) oxygenase family protein; Identified by match to protein family HMM PF03171; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.453 |