Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69527.1 | ABK72087.1 | MSMEG_0428 | MSMEG_0426 | Nitrite reductase [NAD(P)H] small subunit. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00155; match to protein family HMM PF00392. | 0.526 |
ABK69527.1 | nirB | MSMEG_0428 | MSMEG_0427 | Nitrite reductase [NAD(P)H] small subunit. | Nitrite reductase [NAD(P)H], large subunit; Identified by match to protein family HMM PF00070; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM PF04324; match to protein family HMM PF07992; match to protein family HMM TIGR02374; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.999 |
ABK69845.1 | ABK72087.1 | MSMEG_0425 | MSMEG_0426 | Putative membrane protein DcsA; Identified by match to protein family HMM PF00892. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00155; match to protein family HMM PF00392. | 0.906 |
ABK69845.1 | ABK75025.1 | MSMEG_0425 | MSMEG_0424 | Putative membrane protein DcsA; Identified by match to protein family HMM PF00892. | Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. | 0.575 |
ABK72087.1 | ABK69527.1 | MSMEG_0426 | MSMEG_0428 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00155; match to protein family HMM PF00392. | Nitrite reductase [NAD(P)H] small subunit. | 0.526 |
ABK72087.1 | ABK69845.1 | MSMEG_0426 | MSMEG_0425 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00155; match to protein family HMM PF00392. | Putative membrane protein DcsA; Identified by match to protein family HMM PF00892. | 0.906 |
ABK72087.1 | ABK75025.1 | MSMEG_0426 | MSMEG_0424 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00155; match to protein family HMM PF00392. | Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. | 0.431 |
ABK72087.1 | nirB | MSMEG_0426 | MSMEG_0427 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00155; match to protein family HMM PF00392. | Nitrite reductase [NAD(P)H], large subunit; Identified by match to protein family HMM PF00070; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM PF04324; match to protein family HMM PF07992; match to protein family HMM TIGR02374; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.507 |
ABK75025.1 | ABK69845.1 | MSMEG_0424 | MSMEG_0425 | Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. | Putative membrane protein DcsA; Identified by match to protein family HMM PF00892. | 0.575 |
ABK75025.1 | ABK72087.1 | MSMEG_0424 | MSMEG_0426 | Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00155; match to protein family HMM PF00392. | 0.431 |
nirB | ABK69527.1 | MSMEG_0427 | MSMEG_0428 | Nitrite reductase [NAD(P)H], large subunit; Identified by match to protein family HMM PF00070; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM PF04324; match to protein family HMM PF07992; match to protein family HMM TIGR02374; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Nitrite reductase [NAD(P)H] small subunit. | 0.999 |
nirB | ABK72087.1 | MSMEG_0427 | MSMEG_0426 | Nitrite reductase [NAD(P)H], large subunit; Identified by match to protein family HMM PF00070; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM PF04324; match to protein family HMM PF07992; match to protein family HMM TIGR02374; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00155; match to protein family HMM PF00392. | 0.507 |