Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69779.1 | ABK70093.1 | MSMEG_0444 | MSMEG_0443 | Agmatine deiminase; Identified by match to protein family HMM PF04371; Belongs to the agmatine deiminase family. | Identified by match to protein family HMM PF00795. | 0.997 |
| ABK69779.1 | ABK71559.1 | MSMEG_0444 | MSMEG_0446 | Agmatine deiminase; Identified by match to protein family HMM PF04371; Belongs to the agmatine deiminase family. | Putrescine importer; Identified by match to protein family HMM PF00324. | 0.815 |
| ABK69779.1 | ABK71591.1 | MSMEG_0444 | MSMEG_0438 | Agmatine deiminase; Identified by match to protein family HMM PF04371; Belongs to the agmatine deiminase family. | Periplasmic binding protein; Identified by match to protein family HMM PF01497. | 0.444 |
| ABK69779.1 | ABK72014.1 | MSMEG_0444 | MSMEG_0439 | Agmatine deiminase; Identified by match to protein family HMM PF04371; Belongs to the agmatine deiminase family. | Conserved hypothetical protein; Identified by match to protein family HMM PF03601. | 0.448 |
| ABK69779.1 | ABK73107.1 | MSMEG_0444 | MSMEG_0440 | Agmatine deiminase; Identified by match to protein family HMM PF04371; Belongs to the agmatine deiminase family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.449 |
| ABK69779.1 | ABK74199.1 | MSMEG_0444 | MSMEG_0442 | Agmatine deiminase; Identified by match to protein family HMM PF04371; Belongs to the agmatine deiminase family. | Tetracyclin repressor, C- all-alpha domain protein; Identified by match to protein family HMM PF02909. | 0.664 |
| ABK69779.1 | ABK75346.1 | MSMEG_0444 | MSMEG_0441 | Agmatine deiminase; Identified by match to protein family HMM PF04371; Belongs to the agmatine deiminase family. | Conserved hypothetical protein, putative; Identified by match to protein family HMM TIGR03083. | 0.553 |
| ABK69779.1 | ABK75782.1 | MSMEG_0444 | MSMEG_0437 | Agmatine deiminase; Identified by match to protein family HMM PF04371; Belongs to the agmatine deiminase family. | Conserved hypothetical integral membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | 0.402 |
| ABK70093.1 | ABK69779.1 | MSMEG_0443 | MSMEG_0444 | Identified by match to protein family HMM PF00795. | Agmatine deiminase; Identified by match to protein family HMM PF04371; Belongs to the agmatine deiminase family. | 0.997 |
| ABK70093.1 | ABK71559.1 | MSMEG_0443 | MSMEG_0446 | Identified by match to protein family HMM PF00795. | Putrescine importer; Identified by match to protein family HMM PF00324. | 0.766 |
| ABK70093.1 | ABK71591.1 | MSMEG_0443 | MSMEG_0438 | Identified by match to protein family HMM PF00795. | Periplasmic binding protein; Identified by match to protein family HMM PF01497. | 0.450 |
| ABK70093.1 | ABK72014.1 | MSMEG_0443 | MSMEG_0439 | Identified by match to protein family HMM PF00795. | Conserved hypothetical protein; Identified by match to protein family HMM PF03601. | 0.455 |
| ABK70093.1 | ABK73107.1 | MSMEG_0443 | MSMEG_0440 | Identified by match to protein family HMM PF00795. | Hypothetical protein; Identified by Glimmer2; putative. | 0.439 |
| ABK70093.1 | ABK74199.1 | MSMEG_0443 | MSMEG_0442 | Identified by match to protein family HMM PF00795. | Tetracyclin repressor, C- all-alpha domain protein; Identified by match to protein family HMM PF02909. | 0.637 |
| ABK70093.1 | ABK75346.1 | MSMEG_0443 | MSMEG_0441 | Identified by match to protein family HMM PF00795. | Conserved hypothetical protein, putative; Identified by match to protein family HMM TIGR03083. | 0.568 |
| ABK70093.1 | ABK75782.1 | MSMEG_0443 | MSMEG_0437 | Identified by match to protein family HMM PF00795. | Conserved hypothetical integral membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | 0.420 |
| ABK70630.1 | ABK74199.1 | MSMEG_3332 | MSMEG_0442 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440; match to protein family HMM PF02909. | Tetracyclin repressor, C- all-alpha domain protein; Identified by match to protein family HMM PF02909. | 0.598 |
| ABK71559.1 | ABK69779.1 | MSMEG_0446 | MSMEG_0444 | Putrescine importer; Identified by match to protein family HMM PF00324. | Agmatine deiminase; Identified by match to protein family HMM PF04371; Belongs to the agmatine deiminase family. | 0.815 |
| ABK71559.1 | ABK70093.1 | MSMEG_0446 | MSMEG_0443 | Putrescine importer; Identified by match to protein family HMM PF00324. | Identified by match to protein family HMM PF00795. | 0.766 |
| ABK71559.1 | ABK71591.1 | MSMEG_0446 | MSMEG_0438 | Putrescine importer; Identified by match to protein family HMM PF00324. | Periplasmic binding protein; Identified by match to protein family HMM PF01497. | 0.449 |
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