STRINGSTRING
ABK70779.1 ABK70779.1 ABK75328.1 ABK75328.1 ABK71303.1 ABK71303.1 ABK71370.1 ABK71370.1 ABK70346.1 ABK70346.1 ABK75515.1 ABK75515.1 ABK69831.1 ABK69831.1 dps dps ABK74328.1 ABK74328.1 ABK74867.1 ABK74867.1 grpE grpE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
ABK70779.1Conserved hypothetical protein; Identified by match to protein family HMM PF02566. (139 aa)    
Predicted Functional Partners:
ABK75328.1
Transcriptional regulator, MarR family protein; Identified by match to protein family HMM PF01047.
 
  
 0.884
ABK71303.1
Regulatory protein, MarR; Identified by match to protein family HMM PF01047.
 
  
 0.712
ABK71370.1
Conserved hypothetical protein.
   
    0.658
ABK70346.1
Conserved hypothetical protein.
   
    0.657
ABK75515.1
Conserved hypothetical protein.
  
    0.559
ABK69831.1
Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family.
  
  
 0.538
dps
Starvation-induced DNA protecting protein; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction (By similarity). It protects DNA from hydroxyl radical-mediated cleavage. Binds DNA with no apparent sequence specificity without self- aggregation nor promotion of DNA condensation. Is unable to protect DNA from DNase-mediated cleavage (By similarity).
  
  
 0.537
ABK74328.1
Intracellular protease, PfpI family protein; Identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382.
 
  
 0.530
ABK74867.1
Conserved domain protein; Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family.
  
  
 0.506
grpE
Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...]
   
  
 0.476
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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