Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69951.1 | ABK71248.1 | MSMEG_0454 | MSMEG_0452 | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Inner membrane permease YgbN; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791. | 0.622 |
ABK69951.1 | ABK75262.1 | MSMEG_0454 | MSMEG_0451 | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Oxidoreductase, FAD-linked. | 0.411 |
ABK69951.1 | aroK | MSMEG_0454 | MSMEG_0453 | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313. | 0.746 |
ABK71248.1 | ABK69951.1 | MSMEG_0452 | MSMEG_0454 | Inner membrane permease YgbN; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791. | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.622 |
ABK71248.1 | ABK75262.1 | MSMEG_0452 | MSMEG_0451 | Inner membrane permease YgbN; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791. | Oxidoreductase, FAD-linked. | 0.656 |
ABK71248.1 | aroK | MSMEG_0452 | MSMEG_0453 | Inner membrane permease YgbN; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791. | Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313. | 0.855 |
ABK75262.1 | ABK69951.1 | MSMEG_0451 | MSMEG_0454 | Oxidoreductase, FAD-linked. | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.411 |
ABK75262.1 | ABK71248.1 | MSMEG_0451 | MSMEG_0452 | Oxidoreductase, FAD-linked. | Inner membrane permease YgbN; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791. | 0.656 |
ABK75262.1 | aroK | MSMEG_0451 | MSMEG_0453 | Oxidoreductase, FAD-linked. | Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313. | 0.564 |
aroK | ABK69951.1 | MSMEG_0453 | MSMEG_0454 | Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313. | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.746 |
aroK | ABK71248.1 | MSMEG_0453 | MSMEG_0452 | Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313. | Inner membrane permease YgbN; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791. | 0.855 |
aroK | ABK75262.1 | MSMEG_0453 | MSMEG_0451 | Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313. | Oxidoreductase, FAD-linked. | 0.564 |