Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69765.1 | ABK69951.1 | MSMEG_0084 | MSMEG_0454 | Phosphocarrier protein hpr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.635 |
| ABK69765.1 | gnd | MSMEG_0084 | MSMEG_3632 | Phosphocarrier protein hpr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. | 6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.639 |
| ABK69951.1 | ABK69765.1 | MSMEG_0454 | MSMEG_0084 | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Phosphocarrier protein hpr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. | 0.635 |
| ABK69951.1 | ABK69975.1 | MSMEG_0454 | MSMEG_0874 | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.548 |
| ABK69951.1 | ABK71248.1 | MSMEG_0454 | MSMEG_0452 | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Inner membrane permease YgbN; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791. | 0.622 |
| ABK69951.1 | ABK71913.1 | MSMEG_0454 | MSMEG_2489 | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Transcriptional regulator, GntR family protein, putative; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.509 |
| ABK69951.1 | ABK71965.1 | MSMEG_0454 | MSMEG_0455 | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | 0.582 |
| ABK69951.1 | ABK75156.1 | MSMEG_0454 | MSMEG_2531 | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | GntR family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.506 |
| ABK69951.1 | ABK75769.1 | MSMEG_0454 | MSMEG_0179 | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.545 |
| ABK69951.1 | ABK76215.1 | MSMEG_0454 | MSMEG_5375 | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.540 |
| ABK69951.1 | aroK | MSMEG_0454 | MSMEG_0453 | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313. | 0.746 |
| ABK69951.1 | gnd | MSMEG_0454 | MSMEG_3632 | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.820 |
| ABK69975.1 | ABK69951.1 | MSMEG_0874 | MSMEG_0454 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.548 |
| ABK69975.1 | ABK75156.1 | MSMEG_0874 | MSMEG_2531 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | GntR family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.403 |
| ABK69975.1 | ABK75769.1 | MSMEG_0874 | MSMEG_0179 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.763 |
| ABK71248.1 | ABK69951.1 | MSMEG_0452 | MSMEG_0454 | Inner membrane permease YgbN; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791. | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.622 |
| ABK71248.1 | ABK71965.1 | MSMEG_0452 | MSMEG_0455 | Inner membrane permease YgbN; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791. | Aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | 0.416 |
| ABK71248.1 | aroK | MSMEG_0452 | MSMEG_0453 | Inner membrane permease YgbN; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791. | Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313. | 0.855 |
| ABK71913.1 | ABK69951.1 | MSMEG_2489 | MSMEG_0454 | Transcriptional regulator, GntR family protein, putative; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.509 |
| ABK71913.1 | ABK75156.1 | MSMEG_2489 | MSMEG_2531 | Transcriptional regulator, GntR family protein, putative; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | GntR family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.775 |
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