STRINGSTRING
ABK74487.1 ABK74487.1 hslR hslR ABK74583.1 ABK74583.1 ABK72603.1 ABK72603.1 ABK76187.1 ABK76187.1 ABK75674.1 ABK75674.1 corA corA ABK73477.1 ABK73477.1 dnaN dnaN ABK72022.1 ABK72022.1 ABK73758.1 ABK73758.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74487.1CinZ protein; Identified by match to protein family HMM PF01205. (204 aa)    
Predicted Functional Partners:
hslR
Heat shock protein 15; Identified by match to protein family HMM PF01479.
  
  
 0.795
ABK74583.1
Alpha/beta hydrolase fold; Identified by match to protein family HMM PF00561.
  
   0.610
ABK72603.1
MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833.
  
    0.513
ABK76187.1
MmpS4 protein; Identified by match to protein family HMM PF05423.
  
    0.493
ABK75674.1
Conserved hypothetical protein.
  
 
 0.459
corA
Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
  
    0.414
ABK73477.1
Putative magnesium transport protein; Identified by match to protein family HMM PF01544.
  
    0.405
dnaN
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
    
  0.403
ABK72022.1
DNA polymerase III alpha subunit; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.
     
 0.401
ABK73758.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
       0.400
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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