STRINGSTRING
ABK76187.1 ABK76187.1 ABK72603.1 ABK72603.1 ABK73758.1 ABK73758.1 ABK74487.1 ABK74487.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76187.1MmpS4 protein; Identified by match to protein family HMM PF05423. (147 aa)    
Predicted Functional Partners:
ABK72603.1
MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833.
  
    0.786
ABK73758.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
       0.656
ABK74487.1
CinZ protein; Identified by match to protein family HMM PF01205.
  
    0.493
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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