Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK72603.1 | ABK73758.1 | MSMEG_0463 | MSMEG_0465 | MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.623 |
ABK72603.1 | ABK74487.1 | MSMEG_0463 | MSMEG_0461 | MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833. | CinZ protein; Identified by match to protein family HMM PF01205. | 0.513 |
ABK72603.1 | ABK76187.1 | MSMEG_0463 | MSMEG_0462 | MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833. | MmpS4 protein; Identified by match to protein family HMM PF05423. | 0.786 |
ABK73758.1 | ABK72603.1 | MSMEG_0465 | MSMEG_0463 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833. | 0.623 |
ABK73758.1 | ABK74487.1 | MSMEG_0465 | MSMEG_0461 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | CinZ protein; Identified by match to protein family HMM PF01205. | 0.400 |
ABK73758.1 | ABK76187.1 | MSMEG_0465 | MSMEG_0462 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | MmpS4 protein; Identified by match to protein family HMM PF05423. | 0.656 |
ABK74487.1 | ABK72603.1 | MSMEG_0461 | MSMEG_0463 | CinZ protein; Identified by match to protein family HMM PF01205. | MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833. | 0.513 |
ABK74487.1 | ABK73758.1 | MSMEG_0461 | MSMEG_0465 | CinZ protein; Identified by match to protein family HMM PF01205. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.400 |
ABK74487.1 | ABK76187.1 | MSMEG_0461 | MSMEG_0462 | CinZ protein; Identified by match to protein family HMM PF01205. | MmpS4 protein; Identified by match to protein family HMM PF05423. | 0.493 |
ABK76187.1 | ABK72603.1 | MSMEG_0462 | MSMEG_0463 | MmpS4 protein; Identified by match to protein family HMM PF05423. | MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833. | 0.786 |
ABK76187.1 | ABK73758.1 | MSMEG_0462 | MSMEG_0465 | MmpS4 protein; Identified by match to protein family HMM PF05423. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.656 |
ABK76187.1 | ABK74487.1 | MSMEG_0462 | MSMEG_0461 | MmpS4 protein; Identified by match to protein family HMM PF05423. | CinZ protein; Identified by match to protein family HMM PF01205. | 0.493 |