STRINGSTRING
ABK72603.1 ABK72603.1 ABK76187.1 ABK76187.1 ABK73949.1 ABK73949.1 snm snm eccB3 eccB3 ABK71982.1 ABK71982.1 ABK73758.1 ABK73758.1 ABK74560.1 ABK74560.1 ABK75153.1 ABK75153.1 ABK70936.1 ABK70936.1 eccC3 eccC3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK72603.1MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833. (961 aa)    
Predicted Functional Partners:
ABK76187.1
MmpS4 protein; Identified by match to protein family HMM PF05423.
  
    0.786
ABK73949.1
Conserved hypothetical protein.
  
    0.693
snm
Secretion protein Snm4; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG; Belongs to the EccD/Snm4 family.
  
    0.690
eccB3
Conserved hypothetical protein; An ATPase (By similarity). Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG.
 
   0.649
ABK71982.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026.
  
    0.644
ABK73758.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.623
ABK74560.1
acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643.
  
    0.596
ABK75153.1
Conserved hypothetical protein.
  
     0.585
ABK70936.1
Conserved hypothetical protein.
  
     0.585
eccC3
Ftsk/spoiiie family protein; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG.
  
   
 0.576
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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