Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69790.1 | ABK70103.1 | MSMEG_5922 | MSMEG_4757 | Lipid-transfer protein. | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | 0.552 |
ABK69790.1 | ABK70881.1 | MSMEG_5922 | MSMEG_0490 | Lipid-transfer protein. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.721 |
ABK69790.1 | ABK71555.1 | MSMEG_5922 | MSMEG_4116 | Lipid-transfer protein. | 3-hydroxybutyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00725; match to protein family HMM PF02737. | 0.600 |
ABK69790.1 | ABK71785.1 | MSMEG_5922 | MSMEG_0912 | Lipid-transfer protein. | 3-hydroxybutyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00725; match to protein family HMM PF02737. | 0.600 |
ABK69790.1 | ABK71837.1 | MSMEG_5922 | MSMEG_4115 | Lipid-transfer protein. | 3-hydroxybutyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00725; match to protein family HMM PF02737. | 0.600 |
ABK69790.1 | ABK73835.1 | MSMEG_5922 | MSMEG_2236 | Lipid-transfer protein. | Putative thiolase; Identified by match to protein family HMM PF02803; Belongs to the thiolase-like superfamily. Thiolase family. | 0.428 |
ABK69790.1 | ABK74844.1 | MSMEG_5922 | MSMEG_4814 | Lipid-transfer protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF01796. | 0.763 |
ABK69790.1 | ABK75265.1 | MSMEG_5922 | MSMEG_5886 | Lipid-transfer protein. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | 0.720 |
ABK70103.1 | ABK69790.1 | MSMEG_4757 | MSMEG_5922 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Lipid-transfer protein. | 0.552 |
ABK70103.1 | ABK70236.1 | MSMEG_4757 | MSMEG_5521 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | acetyl-CoA acetyltransferase. | 0.555 |
ABK70103.1 | ABK70881.1 | MSMEG_4757 | MSMEG_0490 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.742 |
ABK70103.1 | ABK71555.1 | MSMEG_4757 | MSMEG_4116 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | 3-hydroxybutyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00725; match to protein family HMM PF02737. | 0.516 |
ABK70103.1 | ABK71785.1 | MSMEG_4757 | MSMEG_0912 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | 3-hydroxybutyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00725; match to protein family HMM PF02737. | 0.525 |
ABK70103.1 | ABK71837.1 | MSMEG_4757 | MSMEG_4115 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | 3-hydroxybutyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00725; match to protein family HMM PF02737. | 0.522 |
ABK70103.1 | ABK73835.1 | MSMEG_4757 | MSMEG_2236 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Putative thiolase; Identified by match to protein family HMM PF02803; Belongs to the thiolase-like superfamily. Thiolase family. | 0.548 |
ABK70103.1 | ABK74842.1 | MSMEG_4757 | MSMEG_0489 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Racemase; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | 0.500 |
ABK70103.1 | ABK74844.1 | MSMEG_4757 | MSMEG_4814 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Conserved hypothetical protein; Identified by match to protein family HMM PF01796. | 0.682 |
ABK70103.1 | ABK75265.1 | MSMEG_4757 | MSMEG_5886 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | 0.746 |
ABK70236.1 | ABK70103.1 | MSMEG_5521 | MSMEG_4757 | acetyl-CoA acetyltransferase. | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | 0.555 |
ABK70236.1 | ABK70881.1 | MSMEG_5521 | MSMEG_0490 | acetyl-CoA acetyltransferase. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.742 |
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