STRINGSTRING
ABK73443.1 ABK73443.1 ABK71303.1 ABK71303.1 ABK71262.1 ABK71262.1 stf0 stf0 ABK72118.1 ABK72118.1 ABK74340.1 ABK74340.1 ABK70706.1 ABK70706.1 ABK70495.1 ABK70495.1 ABK72890.1 ABK72890.1 ABK75153.1 ABK75153.1 ABK70936.1 ABK70936.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73443.1Conserved hypothetical protein. (142 aa)    
Predicted Functional Partners:
ABK71303.1
Regulatory protein, MarR; Identified by match to protein family HMM PF01047.
  
    0.775
ABK71262.1
Probable conserved transmembrane protein.
  
    0.739
stf0
Conserved hypothetical protein; Catalyzes the sulfuryl group transfer from 3'- phosphoadenosine-5'-phosphosulfate (PAPS) to trehalose, leading to trehalose-2-sulfate (T2S). The sulfation of trehalose is the first step in the biosynthesis of sulfolipid-1 (SL-1), a major cell wall glycolipid in pathogenic mycobacteria. Cannot use free glucose and unnatural stereoisomers of trehalose (alpha,beta (neo-trehalose) and beta,beta (iso-trehalose)) as substrates.
  
     0.728
ABK72118.1
Conserved hypothetical protein.
  
    0.673
ABK74340.1
Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.
  
    0.650
ABK70706.1
Probable exported protein.
  
     0.635
ABK70495.1
Conserved hypothetical protein.
  
    0.631
ABK72890.1
Conserved hypothetical protein.
 
    0.614
ABK75153.1
Conserved hypothetical protein.
  
     0.613
ABK70936.1
Conserved hypothetical protein.
  
     0.613
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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