STRINGSTRING
ABK71303.1 ABK71303.1 ABK73443.1 ABK73443.1 ABK70779.1 ABK70779.1 ABK73796.1 ABK73796.1 ABK74328.1 ABK74328.1 ABK69590.1 ABK69590.1 ABK76123.1 ABK76123.1 ABK75987.1 ABK75987.1 ABK71233.1 ABK71233.1 ABK71463.1 ABK71463.1 ABK71862.1 ABK71862.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71303.1Regulatory protein, MarR; Identified by match to protein family HMM PF01047. (163 aa)    
Predicted Functional Partners:
ABK73443.1
Conserved hypothetical protein.
  
    0.775
ABK70779.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02566.
 
  
 0.712
ABK73796.1
Transcriptional regulator, Crp/Fnr family protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF00325.
  
  
 0.632
ABK74328.1
Intracellular protease, PfpI family protein; Identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382.
 
    0.613
ABK69590.1
Ferredoxin-dependent glutamate synthase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01645; Belongs to the glutamate synthase family.
     
 0.603
ABK76123.1
MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047.
  
  
 0.597
ABK75987.1
Endoribonuclease L-PSP superfamily protein; Identified by match to protein family HMM PF01042.
  
  
 0.596
ABK71233.1
Identified by match to protein family HMM PF02133; Belongs to the purine-cytosine permease (2.A.39) family.
   
  
 0.594
ABK71463.1
Pyruvate dehydrogenase; Identified by match to protein family HMM PF00205; match to protein family HMM PF00355; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.
  
  
 0.552
ABK71862.1
AmiB; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891; Belongs to the peptidase M20A family.
  
  
 0.547
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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