Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK71204.1 | ABK73311.1 | MSMEG_0391 | MSMEG_1148 | Rmt3 protein. | Mce related protein; Identified by match to protein family HMM PF02470. | 0.525 |
ABK71204.1 | ABK75115.1 | MSMEG_0391 | MSMEG_1143 | Rmt3 protein. | Mce related protein; Identified by match to protein family HMM PF02470. | 0.653 |
ABK71204.1 | ABK75165.1 | MSMEG_0391 | MSMEG_1147 | Rmt3 protein. | Mce related protein; Identified by match to protein family HMM PF02470. | 0.493 |
ABK71204.1 | ABK75405.1 | MSMEG_0391 | MSMEG_0543 | Rmt3 protein. | Conserved hypothetical protein. | 0.486 |
ABK71204.1 | ABK76052.1 | MSMEG_0391 | MSMEG_6815 | Rmt3 protein. | Identified by match to protein family HMM TIGR01409. | 0.549 |
ABK71204.1 | pks | MSMEG_0391 | MSMEG_0408 | Rmt3 protein. | Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801. | 0.781 |
ABK72351.1 | ABK75115.1 | MSMEG_5345 | MSMEG_1143 | Glycosyl hydrolases family protein 16; Identified by match to protein family HMM PF00722. | Mce related protein; Identified by match to protein family HMM PF02470. | 0.403 |
ABK72351.1 | ABK75405.1 | MSMEG_5345 | MSMEG_0543 | Glycosyl hydrolases family protein 16; Identified by match to protein family HMM PF00722. | Conserved hypothetical protein. | 0.565 |
ABK72351.1 | pks | MSMEG_5345 | MSMEG_0408 | Glycosyl hydrolases family protein 16; Identified by match to protein family HMM PF00722. | Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801. | 0.494 |
ABK73124.1 | ABK75405.1 | MSMEG_0194 | MSMEG_0543 | Serine esterase, cutinase family protein; Identified by match to protein family HMM PF01083. | Conserved hypothetical protein. | 0.522 |
ABK73124.1 | pks | MSMEG_0194 | MSMEG_0408 | Serine esterase, cutinase family protein; Identified by match to protein family HMM PF01083. | Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801. | 0.455 |
ABK73311.1 | ABK71204.1 | MSMEG_1148 | MSMEG_0391 | Mce related protein; Identified by match to protein family HMM PF02470. | Rmt3 protein. | 0.525 |
ABK73311.1 | ABK75115.1 | MSMEG_1148 | MSMEG_1143 | Mce related protein; Identified by match to protein family HMM PF02470. | Mce related protein; Identified by match to protein family HMM PF02470. | 0.978 |
ABK73311.1 | ABK75165.1 | MSMEG_1148 | MSMEG_1147 | Mce related protein; Identified by match to protein family HMM PF02470. | Mce related protein; Identified by match to protein family HMM PF02470. | 0.977 |
ABK73311.1 | ABK75405.1 | MSMEG_1148 | MSMEG_0543 | Mce related protein; Identified by match to protein family HMM PF02470. | Conserved hypothetical protein. | 0.527 |
ABK73311.1 | ABK76052.1 | MSMEG_1148 | MSMEG_6815 | Mce related protein; Identified by match to protein family HMM PF02470. | Identified by match to protein family HMM TIGR01409. | 0.730 |
ABK74335.1 | ABK75405.1 | MSMEG_4066 | MSMEG_0543 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.468 |
ABK75115.1 | ABK71204.1 | MSMEG_1143 | MSMEG_0391 | Mce related protein; Identified by match to protein family HMM PF02470. | Rmt3 protein. | 0.653 |
ABK75115.1 | ABK72351.1 | MSMEG_1143 | MSMEG_5345 | Mce related protein; Identified by match to protein family HMM PF02470. | Glycosyl hydrolases family protein 16; Identified by match to protein family HMM PF00722. | 0.403 |
ABK75115.1 | ABK73311.1 | MSMEG_1143 | MSMEG_1148 | Mce related protein; Identified by match to protein family HMM PF02470. | Mce related protein; Identified by match to protein family HMM PF02470. | 0.978 |
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