STRINGSTRING
ABK75405.1 ABK75405.1 ABK75115.1 ABK75115.1 ABK72351.1 ABK72351.1 pks pks ABK73311.1 ABK73311.1 ABK73124.1 ABK73124.1 ABK76052.1 ABK76052.1 ABK71204.1 ABK71204.1 ABK74335.1 ABK74335.1 ABK75485.1 ABK75485.1 ABK75165.1 ABK75165.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75405.1Conserved hypothetical protein. (346 aa)    
Predicted Functional Partners:
ABK75115.1
Mce related protein; Identified by match to protein family HMM PF02470.
  
    0.612
ABK72351.1
Glycosyl hydrolases family protein 16; Identified by match to protein family HMM PF00722.
  
     0.565
pks
Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801.
 
 
 0.555
ABK73311.1
Mce related protein; Identified by match to protein family HMM PF02470.
  
    0.527
ABK73124.1
Serine esterase, cutinase family protein; Identified by match to protein family HMM PF01083.
  
   0.522
ABK76052.1
Identified by match to protein family HMM TIGR01409.
  
    0.516
ABK71204.1
Rmt3 protein.
 
    0.486
ABK74335.1
Conserved hypothetical protein.
 
    0.468
ABK75485.1
Transcriptional regulator, LuxR family protein.
  
  
 0.463
ABK75165.1
Mce related protein; Identified by match to protein family HMM PF02470.
  
    0.461
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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