Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69573.1 | ABK71465.1 | MSMEG_0550 | MSMEG_0551 | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | ABC nitrate/sulfonate/bicarbonate transporter, ATPase subunit; Identified by match to protein family HMM PF00005. | 0.981 |
ABK69573.1 | ABK71685.1 | MSMEG_0550 | MSMEG_0549 | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.991 |
ABK69573.1 | ABK74147.1 | MSMEG_0550 | MSMEG_0547 | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | ISMsm5, transposase; Identified by similarity to GB:CAD18826.1. | 0.533 |
ABK71465.1 | ABK69573.1 | MSMEG_0551 | MSMEG_0550 | ABC nitrate/sulfonate/bicarbonate transporter, ATPase subunit; Identified by match to protein family HMM PF00005. | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | 0.981 |
ABK71465.1 | ABK71685.1 | MSMEG_0551 | MSMEG_0549 | ABC nitrate/sulfonate/bicarbonate transporter, ATPase subunit; Identified by match to protein family HMM PF00005. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.983 |
ABK71465.1 | ABK74147.1 | MSMEG_0551 | MSMEG_0547 | ABC nitrate/sulfonate/bicarbonate transporter, ATPase subunit; Identified by match to protein family HMM PF00005. | ISMsm5, transposase; Identified by similarity to GB:CAD18826.1. | 0.439 |
ABK71685.1 | ABK69573.1 | MSMEG_0549 | MSMEG_0550 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | 0.991 |
ABK71685.1 | ABK71465.1 | MSMEG_0549 | MSMEG_0551 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC nitrate/sulfonate/bicarbonate transporter, ATPase subunit; Identified by match to protein family HMM PF00005. | 0.983 |
ABK71685.1 | ABK74147.1 | MSMEG_0549 | MSMEG_0547 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ISMsm5, transposase; Identified by similarity to GB:CAD18826.1. | 0.639 |
ABK74147.1 | ABK69573.1 | MSMEG_0547 | MSMEG_0550 | ISMsm5, transposase; Identified by similarity to GB:CAD18826.1. | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | 0.533 |
ABK74147.1 | ABK71465.1 | MSMEG_0547 | MSMEG_0551 | ISMsm5, transposase; Identified by similarity to GB:CAD18826.1. | ABC nitrate/sulfonate/bicarbonate transporter, ATPase subunit; Identified by match to protein family HMM PF00005. | 0.439 |
ABK74147.1 | ABK71685.1 | MSMEG_0547 | MSMEG_0549 | ISMsm5, transposase; Identified by similarity to GB:CAD18826.1. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.639 |