Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69648.1 | ABK71374.1 | MSMEG_0676 | MSMEG_5307 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.636 |
| ABK69648.1 | ABK72421.1 | MSMEG_0676 | MSMEG_5860 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.670 |
| ABK69648.1 | ABK72606.1 | MSMEG_0676 | MSMEG_5424 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.677 |
| ABK69648.1 | ABK72657.1 | MSMEG_0676 | MSMEG_3527 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Putative HTH-type transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.768 |
| ABK69648.1 | ABK74448.1 | MSMEG_0676 | MSMEG_0548 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family. | 0.736 |
| ABK69648.1 | ABK74597.1 | MSMEG_0676 | MSMEG_6421 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.703 |
| ABK69648.1 | ABK75039.1 | MSMEG_0676 | MSMEG_1420 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.796 |
| ABK69648.1 | ABK75689.1 | MSMEG_0676 | MSMEG_2043 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.795 |
| ABK69648.1 | ethR | MSMEG_0676 | MSMEG_6441 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Transcriptional regulator, TetR family protein; Involved in the repression of teh monooxygenase EthA which is responsible of the formation of the active metabolite of ethionamide (ETH). | 0.596 |
| ABK70776.1 | ABK74448.1 | MSMEG_0467 | MSMEG_0548 | Membrane transport protein; Identified by match to protein family HMM PF01810; match to protein family HMM TIGR00948. | Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family. | 0.948 |
| ABK71374.1 | ABK69648.1 | MSMEG_5307 | MSMEG_0676 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.636 |
| ABK71374.1 | ABK72606.1 | MSMEG_5307 | MSMEG_5424 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.649 |
| ABK71374.1 | ABK72657.1 | MSMEG_5307 | MSMEG_3527 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Putative HTH-type transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.636 |
| ABK71374.1 | ABK74448.1 | MSMEG_5307 | MSMEG_0548 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family. | 0.714 |
| ABK71374.1 | ABK74597.1 | MSMEG_5307 | MSMEG_6421 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.677 |
| ABK71374.1 | ABK75039.1 | MSMEG_5307 | MSMEG_1420 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.693 |
| ABK71374.1 | ABK75689.1 | MSMEG_5307 | MSMEG_2043 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.686 |
| ABK71374.1 | ethR | MSMEG_5307 | MSMEG_6441 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Transcriptional regulator, TetR family protein; Involved in the repression of teh monooxygenase EthA which is responsible of the formation of the active metabolite of ethionamide (ETH). | 0.598 |
| ABK72421.1 | ABK69648.1 | MSMEG_5860 | MSMEG_0676 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.670 |
| ABK72421.1 | ABK72657.1 | MSMEG_5860 | MSMEG_3527 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Putative HTH-type transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.676 |
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