STRINGSTRING
ABK76167.1 ABK76167.1 ABK71672.1 ABK71672.1 ABK75437.1 ABK75437.1 ABK74632.1 ABK74632.1 ABK73756.1 ABK73756.1 ABK75662.1 ABK75662.1 ABK71334.1 ABK71334.1 ABK74489.1 ABK74489.1 ABK72319.1 ABK72319.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76167.1Major facilitator superfamily protein, putative; Identified by match to protein family HMM PF07690. (407 aa)    
Predicted Functional Partners:
ABK71672.1
acyl-CoA dehydrogenase, middle domain protein; Identified by match to protein family HMM PF02770.
  
    0.780
ABK75437.1
Conserved hypothetical protein.
  
    0.707
ABK74632.1
MmpS1 protein; Identified by match to protein family HMM PF05423.
  
    0.643
ABK73756.1
MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833.
  
    0.641
ABK75662.1
Ferric iron-binding periplasmic protein of ABC transporter; Identified by match to protein family HMM PF01547.
  
  
 0.425
ABK71334.1
ABC Polyamine/Opine/Phosphonate transporter, periplasmic ligand binding protein.
  
  
 0.425
ABK74489.1
ABC transporter, periplasmic substrate-binding protein, putative.
  
  
 0.425
ABK72319.1
Putative ECF sigma factor RpoE1; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.402
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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