STRINGSTRING
ABK71446.1 ABK71446.1 ABK71316.1 ABK71316.1 ABK73440.1 ABK73440.1 ABK74317.1 ABK74317.1 ABK76188.1 ABK76188.1 ABK71286.1 ABK71286.1 ABK71220.1 ABK71220.1 ABK75635.1 ABK75635.1 ABK72533.1 ABK72533.1 mimD mimD ABK72665.1 ABK72665.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71446.1Stas domain, putative; Identified by match to protein family HMM PF01740. (129 aa)    
Predicted Functional Partners:
ABK71316.1
Probable serine/threonine-protein kinase PknK; Identified by match to protein family HMM PF00069; match to protein family HMM PF07721.
   
  
 0.832
ABK73440.1
Carboxylate-amine ligase Nfa27300; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
   
  
 0.819
ABK74317.1
Conserved hypothetical protein.
  
  
 0.764
ABK76188.1
Magnesium or manganese-dependent protein phosphatase; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228.
  
 
 0.722
ABK71286.1
RsbW protein.
  
 
 0.712
ABK71220.1
RsbW protein.
  
 
 0.706
ABK75635.1
Stas domain protein; Identified by match to protein family HMM PF01740.
  
 
 0.672
ABK72533.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
   0.665
mimD
Propane monooxygenase coupling protein; Effector component of the propane 2-monooxygenase multicomponent enzyme system which is involved in the degradation of propane via the O2-dependent hydroxylation of propane.
   
  
 0.611
ABK72665.1
RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02980; Belongs to the sigma-70 factor family.
  
 
 0.607
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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