STRINGSTRING
ABK71795.1 ABK71795.1 rhaB rhaB rhaD rhaD rhaI rhaI ABK74411.1 ABK74411.1 ABK69896.1 ABK69896.1 ABK70099.1 ABK70099.1 ABK70243.1 ABK70243.1 rhaU rhaU ABK69765.1 ABK69765.1 ABK70442.1 ABK70442.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
ABK71795.1Putative rhamnose catabolism operon transcriptional regulator; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. (333 aa)    
Predicted Functional Partners:
rhaB
Rhamnulokinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.
 
 
 
 0.917
rhaD
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00596; match to protein family HMM TIGR02632.
 
 
 0.810
rhaI
L-rhamnose isomerase; Identified by match to protein family HMM TIGR02635.
 
    0.805
ABK74411.1
Multiphosphoryl transfer protein (MTP); Identified by match to protein family HMM PF00381; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF03610; match to protein family HMM PF05524; match to protein family HMM TIGR01003; match to protein family HMM TIGR01417; match to protein family HMM TIGR02364; Belongs to the PEP-utilizing enzyme family.
   
 
 0.745
ABK69896.1
Putative rhamnose tranport protein, MFS family protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
   
 0.687
ABK70099.1
Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
   
 
 0.676
ABK70243.1
Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
   
 
 0.676
rhaU
L-rhamnose 1-epimerase; Identified by match to protein family HMM PF05336.
 
     0.654
ABK69765.1
Phosphocarrier protein hpr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003.
   
 
 0.417
ABK70442.1
PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.
     
 0.413
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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