STRINGSTRING
ABK69602.1 ABK69602.1 ABK75442.1 ABK75442.1 ABK73015.1 ABK73015.1 ABK70579.1 ABK70579.1 ABK74264.1 ABK74264.1 ABK74627.1 ABK74627.1 ABK70819.1 ABK70819.1 ABK71072.1 ABK71072.1 ABK74706.1 ABK74706.1 ABK76139.1 ABK76139.1 ABK71393.1 ABK71393.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK69602.1Glycolate oxidase; Identified by match to protein family HMM PF02754. (245 aa)    
Predicted Functional Partners:
ABK75442.1
Iron-sulfur cluster binding protein; Identified by match to protein family HMM TIGR00273.
 
 0.998
ABK73015.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02589.
 
 
 0.988
ABK70579.1
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.677
ABK74264.1
Bacterial regulatory protein, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
  
  
 0.590
ABK74627.1
Glycerol-3-phosphate dehydrogenase 2; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.454
ABK70819.1
Glycerol-3-phosphate dehydrogenase 2; Identified by match to protein family HMM PF01266; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.453
ABK71072.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.436
ABK74706.1
Glycolate oxidase subunit; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913.
 
  
 0.429
ABK76139.1
Pyruvate synthase; Identified by match to protein family HMM PF01855.
  
  
 0.427
ABK71393.1
Succinate dehydrogenase; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384.
   
 
 0.418
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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