Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69790.1 | ABK70906.1 | MSMEG_5922 | MSMEG_5915 | Lipid-transfer protein. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | 0.965 |
ABK69790.1 | ABK71155.1 | MSMEG_5922 | MSMEG_0603 | Lipid-transfer protein. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | 0.756 |
ABK69790.1 | ABK72385.1 | MSMEG_5922 | MSMEG_5999 | Lipid-transfer protein. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.622 |
ABK69790.1 | ABK73497.1 | MSMEG_5922 | MSMEG_5991 | Lipid-transfer protein. | MaoC like domain, putative; Identified by match to protein family HMM PF01575. | 0.935 |
ABK69790.1 | ABK74714.1 | MSMEG_5922 | MSMEG_5990 | Lipid-transfer protein. | Lipid-transfer protein. | 0.866 |
ABK69790.1 | ABK74969.1 | MSMEG_5922 | MSMEG_6001 | Lipid-transfer protein. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | 0.923 |
ABK69790.1 | ABK75469.1 | MSMEG_5922 | MSMEG_5923 | Lipid-transfer protein. | acetyl-CoA acetyltransferase. | 0.961 |
ABK69790.1 | ABK75596.1 | MSMEG_5922 | MSMEG_5943 | Lipid-transfer protein. | Putative peroxisomal multifunctional enzyme type 2; Identified by match to protein family HMM PF01575. | 0.762 |
ABK69790.1 | ABK75990.1 | MSMEG_5922 | MSMEG_5720 | Lipid-transfer protein. | Putative 3-hydroxyacyl-CoA dehydrogenase; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737. | 0.915 |
ABK70906.1 | ABK69790.1 | MSMEG_5915 | MSMEG_5922 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Lipid-transfer protein. | 0.965 |
ABK70906.1 | ABK71155.1 | MSMEG_5915 | MSMEG_0603 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | 0.672 |
ABK70906.1 | ABK72385.1 | MSMEG_5915 | MSMEG_5999 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.459 |
ABK70906.1 | ABK73497.1 | MSMEG_5915 | MSMEG_5991 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | MaoC like domain, putative; Identified by match to protein family HMM PF01575. | 0.833 |
ABK70906.1 | ABK74714.1 | MSMEG_5915 | MSMEG_5990 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Lipid-transfer protein. | 0.897 |
ABK70906.1 | ABK75469.1 | MSMEG_5915 | MSMEG_5923 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | acetyl-CoA acetyltransferase. | 0.978 |
ABK70906.1 | ABK75596.1 | MSMEG_5915 | MSMEG_5943 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Putative peroxisomal multifunctional enzyme type 2; Identified by match to protein family HMM PF01575. | 0.800 |
ABK70906.1 | ABK75990.1 | MSMEG_5915 | MSMEG_5720 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Putative 3-hydroxyacyl-CoA dehydrogenase; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737. | 0.765 |
ABK71155.1 | ABK69790.1 | MSMEG_0603 | MSMEG_5922 | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | Lipid-transfer protein. | 0.756 |
ABK71155.1 | ABK70906.1 | MSMEG_0603 | MSMEG_5915 | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | 0.672 |
ABK71155.1 | ABK72385.1 | MSMEG_0603 | MSMEG_5999 | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.685 |
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