STRINGSTRING
ABK72706.1 ABK72706.1 ABK72141.1 ABK72141.1 ABK72515.1 ABK72515.1 ABK70951.1 ABK70951.1 ABK72421.1 ABK72421.1 ABK75039.1 ABK75039.1 ABK75711.1 ABK75711.1 ABK70809.1 ABK70809.1 ABK70143.1 ABK70143.1 ABK71155.1 ABK71155.1 ABK73706.1 ABK73706.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72706.1Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. (209 aa)    
Predicted Functional Partners:
ABK72141.1
Conserved hypothetical protein.
 
    0.910
ABK72515.1
Identified by match to protein family HMM PF00903.
 
     0.797
ABK70951.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07848; match to protein family HMM PF08223.
  
    0.740
ABK72421.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.723
ABK75039.1
Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440.
  
  
 0.719
ABK75711.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.716
ABK70809.1
Glyoxylate reductase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
    0.714
ABK70143.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.713
ABK71155.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770.
 
    0.690
ABK73706.1
DNA-binding response regulator, PhoP family protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
   
  
 0.668
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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