Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70115.1 | ABK70884.1 | MSMEG_3842 | MSMEG_0610 | Putative esterase. | Beta-lactamase; Identified by match to protein family HMM PF00753. | 0.422 |
ABK70115.1 | ABK71854.1 | MSMEG_3842 | MSMEG_5739 | Putative esterase. | Putative long-chain fatty-acid--CoA ligase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | 0.497 |
ABK70609.1 | ABK70884.1 | MSMEG_4618 | MSMEG_0610 | Identified by match to protein family HMM PF00857. | Beta-lactamase; Identified by match to protein family HMM PF00753. | 0.479 |
ABK70687.1 | ABK70884.1 | MSMEG_3290 | MSMEG_0610 | Identified by match to protein family HMM PF00196. | Beta-lactamase; Identified by match to protein family HMM PF00753. | 0.486 |
ABK70884.1 | ABK70115.1 | MSMEG_0610 | MSMEG_3842 | Beta-lactamase; Identified by match to protein family HMM PF00753. | Putative esterase. | 0.422 |
ABK70884.1 | ABK70609.1 | MSMEG_0610 | MSMEG_4618 | Beta-lactamase; Identified by match to protein family HMM PF00753. | Identified by match to protein family HMM PF00857. | 0.479 |
ABK70884.1 | ABK70687.1 | MSMEG_0610 | MSMEG_3290 | Beta-lactamase; Identified by match to protein family HMM PF00753. | Identified by match to protein family HMM PF00196. | 0.486 |
ABK70884.1 | ABK71737.1 | MSMEG_0610 | MSMEG_5279 | Beta-lactamase; Identified by match to protein family HMM PF00753. | Conserved hypothetical protein. | 0.447 |
ABK70884.1 | ABK71854.1 | MSMEG_0610 | MSMEG_5739 | Beta-lactamase; Identified by match to protein family HMM PF00753. | Putative long-chain fatty-acid--CoA ligase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | 0.467 |
ABK70884.1 | ABK72793.1 | MSMEG_0610 | MSMEG_3836 | Beta-lactamase; Identified by match to protein family HMM PF00753. | Conserved hypothetical protein. | 0.533 |
ABK70884.1 | ABK73818.1 | MSMEG_0610 | MSMEG_4589 | Beta-lactamase; Identified by match to protein family HMM PF00753. | Rhodanese domain protein/cystathionine beta-lyase. | 0.480 |
ABK70884.1 | ABK74831.1 | MSMEG_0610 | MSMEG_0609 | Beta-lactamase; Identified by match to protein family HMM PF00753. | Helix-turn-helix domain protein; Identified by match to protein family HMM PF01381. | 0.677 |
ABK70884.1 | ABK75576.1 | MSMEG_0610 | MSMEG_0611 | Beta-lactamase; Identified by match to protein family HMM PF00753. | Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | 0.851 |
ABK70884.1 | ABK75874.1 | MSMEG_0610 | MSMEG_0607 | Beta-lactamase; Identified by match to protein family HMM PF00753. | Methyltransferase, putative, family protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.553 |
ABK71737.1 | ABK70884.1 | MSMEG_5279 | MSMEG_0610 | Conserved hypothetical protein. | Beta-lactamase; Identified by match to protein family HMM PF00753. | 0.447 |
ABK71737.1 | ABK71854.1 | MSMEG_5279 | MSMEG_5739 | Conserved hypothetical protein. | Putative long-chain fatty-acid--CoA ligase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | 0.462 |
ABK71854.1 | ABK70115.1 | MSMEG_5739 | MSMEG_3842 | Putative long-chain fatty-acid--CoA ligase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | Putative esterase. | 0.497 |
ABK71854.1 | ABK70884.1 | MSMEG_5739 | MSMEG_0610 | Putative long-chain fatty-acid--CoA ligase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | Beta-lactamase; Identified by match to protein family HMM PF00753. | 0.467 |
ABK71854.1 | ABK71737.1 | MSMEG_5739 | MSMEG_5279 | Putative long-chain fatty-acid--CoA ligase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | Conserved hypothetical protein. | 0.462 |
ABK71854.1 | ABK73818.1 | MSMEG_5739 | MSMEG_4589 | Putative long-chain fatty-acid--CoA ligase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | Rhodanese domain protein/cystathionine beta-lyase. | 0.470 |
page 1 of 2