Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70524.1 | ABK73177.1 | MSMEG_3404 | MSMEG_0625 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Conserved hypothetical protein. | 0.615 |
ABK70524.1 | ABK74751.1 | MSMEG_3404 | MSMEG_3569 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Conserved hypothetical protein. | 0.586 |
ABK71297.1 | ABK73177.1 | MSMEG_0624 | MSMEG_0625 | Identified by match to protein family HMM PF00082. | Conserved hypothetical protein. | 0.831 |
ABK71297.1 | ABK73967.1 | MSMEG_0624 | MSMEG_1534 | Identified by match to protein family HMM PF00082. | Probable conserved membrane protein; Identified by match to protein family HMM PF05108. | 0.678 |
ABK71325.1 | ABK71573.1 | MSMEG_0627 | MSMEG_0629 | Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366. | Trans-aconitate 2-methyltransferase. | 0.500 |
ABK71325.1 | ABK73177.1 | MSMEG_0627 | MSMEG_0625 | Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366. | Conserved hypothetical protein. | 0.745 |
ABK71325.1 | ABK75356.1 | MSMEG_0627 | MSMEG_0628 | Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366. | Identified by match to protein family HMM PF04909. | 0.682 |
ABK71573.1 | ABK71325.1 | MSMEG_0629 | MSMEG_0627 | Trans-aconitate 2-methyltransferase. | Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366. | 0.500 |
ABK71573.1 | ABK73177.1 | MSMEG_0629 | MSMEG_0625 | Trans-aconitate 2-methyltransferase. | Conserved hypothetical protein. | 0.739 |
ABK71573.1 | ABK75356.1 | MSMEG_0629 | MSMEG_0628 | Trans-aconitate 2-methyltransferase. | Identified by match to protein family HMM PF04909. | 0.617 |
ABK72305.1 | ABK73177.1 | MSMEG_6575 | MSMEG_0625 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Conserved hypothetical protein. | 0.625 |
ABK73177.1 | ABK70524.1 | MSMEG_0625 | MSMEG_3404 | Conserved hypothetical protein. | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | 0.615 |
ABK73177.1 | ABK71297.1 | MSMEG_0625 | MSMEG_0624 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00082. | 0.831 |
ABK73177.1 | ABK71325.1 | MSMEG_0625 | MSMEG_0627 | Conserved hypothetical protein. | Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366. | 0.745 |
ABK73177.1 | ABK71573.1 | MSMEG_0625 | MSMEG_0629 | Conserved hypothetical protein. | Trans-aconitate 2-methyltransferase. | 0.739 |
ABK73177.1 | ABK72305.1 | MSMEG_0625 | MSMEG_6575 | Conserved hypothetical protein. | Beta-lactamase; Identified by match to protein family HMM PF00144. | 0.625 |
ABK73177.1 | ABK73949.1 | MSMEG_0625 | MSMEG_4943 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.628 |
ABK73177.1 | ABK73967.1 | MSMEG_0625 | MSMEG_1534 | Conserved hypothetical protein. | Probable conserved membrane protein; Identified by match to protein family HMM PF05108. | 0.753 |
ABK73177.1 | ABK74158.1 | MSMEG_0625 | MSMEG_1538 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the WXG100 family. | 0.759 |
ABK73177.1 | ABK74751.1 | MSMEG_0625 | MSMEG_3569 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.669 |
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