STRINGSTRING
ABK73177.1 ABK73177.1 ABK71297.1 ABK71297.1 ABK75356.1 ABK75356.1 ABK74158.1 ABK74158.1 ABK73967.1 ABK73967.1 ABK71325.1 ABK71325.1 ABK71573.1 ABK71573.1 ABK74751.1 ABK74751.1 ABK73949.1 ABK73949.1 ABK72305.1 ABK72305.1 ABK70524.1 ABK70524.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73177.1Conserved hypothetical protein. (399 aa)    
Predicted Functional Partners:
ABK71297.1
Identified by match to protein family HMM PF00082.
  
  
 0.831
ABK75356.1
Identified by match to protein family HMM PF04909.
       0.789
ABK74158.1
Conserved hypothetical protein; Belongs to the WXG100 family.
   
  
 0.759
ABK73967.1
Probable conserved membrane protein; Identified by match to protein family HMM PF05108.
  
  
 0.753
ABK71325.1
Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366.
  
    0.745
ABK71573.1
Trans-aconitate 2-methyltransferase.
       0.739
ABK74751.1
Conserved hypothetical protein.
  
     0.669
ABK73949.1
Conserved hypothetical protein.
  
     0.628
ABK72305.1
Beta-lactamase; Identified by match to protein family HMM PF00144.
 
     0.625
ABK70524.1
HNH endonuclease domain protein; Identified by match to protein family HMM PF01844.
 
     0.615
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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