Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71094.1 | ABK71683.1 | MSMEG_1823 | MSMEG_0633 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | PAP2 superfamily protein; Identified by match to protein family HMM PF00781; match to protein family HMM PF01569. | 0.647 |
| ABK71094.1 | ABK73525.1 | MSMEG_1823 | MSMEG_0634 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | PAP2 superfamily protein; Identified by match to protein family HMM PF01569. | 0.556 |
| ABK71094.1 | ABK74053.1 | MSMEG_1823 | MSMEG_1864 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | Transposase. | 0.523 |
| ABK71094.1 | ABK74760.1 | MSMEG_1823 | MSMEG_2469 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550. | 0.475 |
| ABK71094.1 | ABK76062.1 | MSMEG_1823 | MSMEG_4009 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111. | 0.554 |
| ABK71094.1 | ABK76075.1 | MSMEG_1823 | MSMEG_5043 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | LprE protein. | 0.529 |
| ABK71094.1 | rplF | MSMEG_1823 | MSMEG_1470 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.641 |
| ABK71683.1 | ABK71094.1 | MSMEG_0633 | MSMEG_1823 | PAP2 superfamily protein; Identified by match to protein family HMM PF00781; match to protein family HMM PF01569. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | 0.647 |
| ABK71683.1 | ABK73525.1 | MSMEG_0633 | MSMEG_0634 | PAP2 superfamily protein; Identified by match to protein family HMM PF00781; match to protein family HMM PF01569. | PAP2 superfamily protein; Identified by match to protein family HMM PF01569. | 0.882 |
| ABK71683.1 | ABK73777.1 | MSMEG_0633 | MSMEG_3767 | PAP2 superfamily protein; Identified by match to protein family HMM PF00781; match to protein family HMM PF01569. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.655 |
| ABK71683.1 | ABK74053.1 | MSMEG_0633 | MSMEG_1864 | PAP2 superfamily protein; Identified by match to protein family HMM PF00781; match to protein family HMM PF01569. | Transposase. | 0.715 |
| ABK71683.1 | ABK74760.1 | MSMEG_0633 | MSMEG_2469 | PAP2 superfamily protein; Identified by match to protein family HMM PF00781; match to protein family HMM PF01569. | AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550. | 0.620 |
| ABK71683.1 | ABK76062.1 | MSMEG_0633 | MSMEG_4009 | PAP2 superfamily protein; Identified by match to protein family HMM PF00781; match to protein family HMM PF01569. | Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111. | 0.634 |
| ABK71683.1 | ABK76075.1 | MSMEG_0633 | MSMEG_5043 | PAP2 superfamily protein; Identified by match to protein family HMM PF00781; match to protein family HMM PF01569. | LprE protein. | 0.670 |
| ABK71683.1 | groL-3 | MSMEG_0633 | MSMEG_1978 | PAP2 superfamily protein; Identified by match to protein family HMM PF00781; match to protein family HMM PF01569. | Chaperonin GroL; Plays an essential role in the productive folding of MimA and MimC, and thus in the formation of the active MimABCD complex. Belongs to the chaperonin (HSP60) family. | 0.620 |
| ABK71683.1 | rplF | MSMEG_0633 | MSMEG_1470 | PAP2 superfamily protein; Identified by match to protein family HMM PF00781; match to protein family HMM PF01569. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.734 |
| ABK71683.1 | saeC | MSMEG_0633 | MSMEG_0046 | PAP2 superfamily protein; Identified by match to protein family HMM PF00781; match to protein family HMM PF01569. | Conserved hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) strain. | 0.855 |
| ABK73525.1 | ABK71094.1 | MSMEG_0634 | MSMEG_1823 | PAP2 superfamily protein; Identified by match to protein family HMM PF01569. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | 0.556 |
| ABK73525.1 | ABK71683.1 | MSMEG_0634 | MSMEG_0633 | PAP2 superfamily protein; Identified by match to protein family HMM PF01569. | PAP2 superfamily protein; Identified by match to protein family HMM PF00781; match to protein family HMM PF01569. | 0.882 |
| ABK73525.1 | ABK73777.1 | MSMEG_0634 | MSMEG_3767 | PAP2 superfamily protein; Identified by match to protein family HMM PF01569. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.565 |
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