Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK73463.1 | ABK73621.1 | MSMEG_0637 | MSMEG_4263 | Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266. | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | 0.971 |
| ABK73463.1 | ABK74024.1 | MSMEG_0637 | MSMEG_1782 | Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106. | 0.934 |
| ABK73463.1 | ABK74866.1 | MSMEG_0637 | MSMEG_2657 | Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266. | Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family. | 0.961 |
| ABK73463.1 | ABK75074.1 | MSMEG_0637 | MSMEG_4261 | Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266. | Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034. | 0.920 |
| ABK73463.1 | ABK75868.1 | MSMEG_0637 | MSMEG_0636 | Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266. | Conserved hypothetical protein. | 0.891 |
| ABK73463.1 | atpFH | MSMEG_0637 | MSMEG_4939 | Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266. | ATP synthase delta chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity). | 0.933 |
| ABK73463.1 | nuoC | MSMEG_0637 | MSMEG_2061 | Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266. | NADH-quinone oxidoreductase chain c; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. | 0.903 |
| ABK73463.1 | nuoD | MSMEG_0637 | MSMEG_2060 | Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266. | NADH-quinone oxidoreducatase, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.914 |
| ABK73463.1 | nuoG | MSMEG_0637 | MSMEG_2057 | Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266. | NADH-quinone oxidoreductase, G subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.908 |
| ABK73463.1 | nuoI | MSMEG_0637 | MSMEG_2055 | Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266. | NADH-quinone oxidoreductase, I subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.926 |
| ABK73621.1 | ABK73463.1 | MSMEG_4263 | MSMEG_0637 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266. | 0.971 |
| ABK73621.1 | ABK74866.1 | MSMEG_4263 | MSMEG_2657 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family. | 0.981 |
| ABK73621.1 | ABK75074.1 | MSMEG_4263 | MSMEG_4261 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034. | 0.999 |
| ABK73621.1 | ABK75868.1 | MSMEG_4263 | MSMEG_0636 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | Conserved hypothetical protein. | 0.449 |
| ABK73621.1 | atpFH | MSMEG_4263 | MSMEG_4939 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | ATP synthase delta chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity). | 0.945 |
| ABK73621.1 | nuoC | MSMEG_4263 | MSMEG_2061 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | NADH-quinone oxidoreductase chain c; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. | 0.966 |
| ABK73621.1 | nuoD | MSMEG_4263 | MSMEG_2060 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | NADH-quinone oxidoreducatase, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.965 |
| ABK73621.1 | nuoG | MSMEG_4263 | MSMEG_2057 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | NADH-quinone oxidoreductase, G subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.956 |
| ABK73621.1 | nuoI | MSMEG_4263 | MSMEG_2055 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | NADH-quinone oxidoreductase, I subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.964 |
| ABK74024.1 | ABK73463.1 | MSMEG_1782 | MSMEG_0637 | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106. | Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266. | 0.934 |
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