STRINGSTRING
ABK69570.1 ABK69570.1 ABK75911.1 ABK75911.1 cobA cobA ABK71360.1 ABK71360.1 ABK75630.1 ABK75630.1 ABK72747.1 ABK72747.1 ABK72964.1 ABK72964.1 ABK72013.1 ABK72013.1 ABK71497.1 ABK71497.1 ABK75526.1 ABK75526.1 ABK73398.1 ABK73398.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK69570.1Conserved hypothetical protein. (217 aa)    
Predicted Functional Partners:
ABK75911.1
Hypothetical protein; Identified by Glimmer2; putative.
 
 
 0.770
cobA
uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; match to protein family HMM TIGR01470.
  
  
 0.683
ABK71360.1
ABC-type transport system periplasmic substrate-binding protein; Identified by match to protein family HMM PF01094.
  
 
 0.589
ABK75630.1
Putative periplasmic binding protein; Identified by match to protein family HMM PF01094.
  
 
 0.587
ABK72747.1
Branched-chain amino acid ABC transporter substrate-binding protein; Identified by match to protein family HMM PF01094.
  
 
 0.587
ABK72964.1
Nitrile hydratase regulator1.
  
 
 0.587
ABK72013.1
Hydrophobic amino acid ABC transporter, putative; Identified by match to protein family HMM PF01094.
  
 
 0.586
ABK71497.1
S-(hydroxymethyl)glutathione dehydrogenase; Identified by match to protein family HMM PF00107.
  
  
 0.574
ABK75526.1
ChaB protein; Identified by match to protein family HMM PF06150.
 
  
 0.530
ABK73398.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.528
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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