STRINGSTRING
ABK76213.1 ABK76213.1 ABK70477.1 ABK70477.1 ABK75672.1 ABK75672.1 ABK75508.1 ABK75508.1 ABK74802.1 ABK74802.1 ABK69603.1 ABK69603.1 ftsQ ftsQ ABK75804.1 ABK75804.1 ABK70640.1 ABK70640.1 ABK74551.1 ABK74551.1 ABK74294.1 ABK74294.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76213.1Identified by match to protein family HMM PF03734. (336 aa)    
Predicted Functional Partners:
ABK70477.1
Identified by match to protein family HMM PF03734.
  
  
 0.775
ABK75672.1
Probable conserved integral membrane protein; Identified by match to protein family HMM PF02517.
  
  
 0.725
ABK75508.1
Abortive infection protein; Identified by match to protein family HMM PF02517.
  
  
 0.725
ABK74802.1
Methionine synthase, vitamin-B12 independent; Identified by match to protein family HMM PF01717.
  
    0.665
ABK69603.1
Caax amino protease family protein; Identified by match to protein family HMM PF02517.
  
  
 0.627
ftsQ
Putative Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
  
 0.559
ABK75804.1
Conserved hypothetical protein; Identified by match to protein family HMM PF08044.
 
    0.490
ABK70640.1
Conserved hypothetical protein.
  
    0.475
ABK74551.1
Conserved domain protein.
  
    0.463
ABK74294.1
Putative cytochrome P450 144; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
  
    0.452
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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