Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70225.1 | ABK70355.1 | MSMEG_6109 | MSMEG_0806 | LpqG protein; Identified by match to protein family HMM PF04402. | Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389. | 0.781 |
| ABK70225.1 | ABK73557.1 | MSMEG_6109 | MSMEG_0704 | LpqG protein; Identified by match to protein family HMM PF04402. | LpqJ protein. | 0.761 |
| ABK70225.1 | ABK73946.1 | MSMEG_6109 | MSMEG_5879 | LpqG protein; Identified by match to protein family HMM PF04402. | D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. | 0.757 |
| ABK70225.1 | ABK76075.1 | MSMEG_6109 | MSMEG_5043 | LpqG protein; Identified by match to protein family HMM PF04402. | LprE protein. | 0.759 |
| ABK70225.1 | ABK76192.1 | MSMEG_6109 | MSMEG_6369 | LpqG protein; Identified by match to protein family HMM PF04402. | O-antigen export system, permease protein; Identified by match to protein family HMM PF01061. | 0.754 |
| ABK70248.1 | ABK72261.1 | MSMEG_0705 | MSMEG_0702 | Putative permease of the major facilitator superfamily protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Monooxygenase; Identified by match to protein family HMM PF00296. | 0.454 |
| ABK70248.1 | ABK72951.1 | MSMEG_0705 | MSMEG_0706 | Putative permease of the major facilitator superfamily protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 4-carboxy-4-hydroxy-2-oxoadipate aldolase; Identified by match to protein family HMM PF03737. | 0.778 |
| ABK70248.1 | ABK73171.1 | MSMEG_0705 | MSMEG_0703 | Putative permease of the major facilitator superfamily protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03083; match to protein family HMM TIGR03085. | 0.508 |
| ABK70248.1 | ABK73557.1 | MSMEG_0705 | MSMEG_0704 | Putative permease of the major facilitator superfamily protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | LpqJ protein. | 0.617 |
| ABK70248.1 | ABK73992.1 | MSMEG_0705 | MSMEG_0707 | Putative permease of the major facilitator superfamily protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Conserved hypothetical protein; Identified by similarity to GB:CAD18384.1; match to protein family HMM PF03737. | 0.781 |
| ABK70355.1 | ABK70225.1 | MSMEG_0806 | MSMEG_6109 | Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389. | LpqG protein; Identified by match to protein family HMM PF04402. | 0.781 |
| ABK70355.1 | ABK73557.1 | MSMEG_0806 | MSMEG_0704 | Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389. | LpqJ protein. | 0.763 |
| ABK70355.1 | ABK73946.1 | MSMEG_0806 | MSMEG_5879 | Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389. | D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. | 0.762 |
| ABK70355.1 | ABK76075.1 | MSMEG_0806 | MSMEG_5043 | Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389. | LprE protein. | 0.781 |
| ABK70355.1 | ABK76192.1 | MSMEG_0806 | MSMEG_6369 | Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389. | O-antigen export system, permease protein; Identified by match to protein family HMM PF01061. | 0.756 |
| ABK72261.1 | ABK70248.1 | MSMEG_0702 | MSMEG_0705 | Monooxygenase; Identified by match to protein family HMM PF00296. | Putative permease of the major facilitator superfamily protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.454 |
| ABK72261.1 | ABK72951.1 | MSMEG_0702 | MSMEG_0706 | Monooxygenase; Identified by match to protein family HMM PF00296. | 4-carboxy-4-hydroxy-2-oxoadipate aldolase; Identified by match to protein family HMM PF03737. | 0.430 |
| ABK72261.1 | ABK73171.1 | MSMEG_0702 | MSMEG_0703 | Monooxygenase; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03083; match to protein family HMM TIGR03085. | 0.774 |
| ABK72261.1 | ABK73557.1 | MSMEG_0702 | MSMEG_0704 | Monooxygenase; Identified by match to protein family HMM PF00296. | LpqJ protein. | 0.567 |
| ABK72261.1 | ABK73992.1 | MSMEG_0702 | MSMEG_0707 | Monooxygenase; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by similarity to GB:CAD18384.1; match to protein family HMM PF03737. | 0.430 |
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