STRINGSTRING
ABK72872.1 ABK72872.1 galK galK ABK73518.1 ABK73518.1 ABK69654.1 ABK69654.1 ABK75692.1 ABK75692.1 ABK70975.1 ABK70975.1 galT galT ABK72663.1 ABK72663.1 ABK74090.1 ABK74090.1 pheT pheT dacB dacB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72872.1Aldose 1-epimerase subfamily protein; Identified by match to protein family HMM PF01263. (300 aa)    
Predicted Functional Partners:
galK
Galactokinase; Identified by match to protein family HMM PF00288; match to protein family HMM TIGR00131; Belongs to the GHMP kinase family. GalK subfamily.
  
 0.983
ABK73518.1
Polyphosphate glucokinase; Identified by match to protein family HMM PF00480.
  
 
 0.914
ABK69654.1
Glucokinase; Identified by match to protein family HMM PF00480.
  
 
 0.913
ABK75692.1
Identified by match to protein family HMM PF00480.
  
 
 0.912
ABK70975.1
Alpha-galactosidase; Identified by match to protein family HMM PF02056.
    
 0.904
galT
Galactose-1-phosphate uridylyltransferase; Identified by match to protein family HMM PF01087; match to protein family HMM PF02744; match to protein family HMM TIGR00209.
  
 
 0.748
ABK72663.1
Flavohemoprotein; Identified by match to protein family HMM PF00042; match to protein family HMM PF00175; match to protein family HMM PF00970; Belongs to the globin family.
       0.731
ABK74090.1
Integral membrane protein.
  
    0.664
pheT
phenylalanyl-tRNA synthetase, beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.646
dacB
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; Carboxypeptidase that cleaves terminal D-alanine from peptidoglycan in the mycobacterial cell wall. May cleave L-Lys-D-Ala and/or D-Ala-D-Ala peptide bonds. Exerts important effects on mycobacterial cell morphology and cell division. Belongs to the peptidase S13 family.
 
    0.592
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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