STRINGSTRING
ABK69806.1 ABK69806.1 dapB-2 dapB-2 ABK75049.1 ABK75049.1 ABK72891.1 ABK72891.1 ABK73856.1 ABK73856.1 ABK73058.1 ABK73058.1 ABK72040.1 ABK72040.1 ABK72135.1 ABK72135.1 ABK70836.1 ABK70836.1 ABK73697.1 ABK73697.1 ABK74466.1 ABK74466.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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Experiments
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Textmining
[Homology]
Score
ABK69806.1Putative transcriptional regulator; Identified by match to protein family HMM PF00440. (220 aa)    
Predicted Functional Partners:
dapB-2
Dihydrodipicolinate reductase, N-terminus domain protein; Identified by match to protein family HMM PF01113.
  
    0.794
ABK75049.1
Rieske [2Fe-2S] domain protein; Identified by match to protein family HMM PF00355.
  
    0.794
ABK72891.1
Conserved hypothetical protein.
  
    0.595
ABK73856.1
Dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.499
ABK73058.1
Conserved hypothetical protein.
   
    0.499
ABK72040.1
YaeQ protein; Identified by match to protein family HMM PF07152.
   
    0.488
ABK72135.1
Conserved hypothetical protein.
  
    0.451
ABK70836.1
Spou rRNA methylase family protein; Identified by match to protein family HMM PF00588.
  
    0.451
ABK73697.1
Glycosyl hydrolase family protein 76; Identified by match to protein family HMM PF03663.
  
    0.409
ABK74466.1
Conserved hypothetical protein.
  
    0.409
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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