STRINGSTRING
ABK72135.1 ABK72135.1 ABK70836.1 ABK70836.1 ABK73697.1 ABK73697.1 ABK73856.1 ABK73856.1 ABK72891.1 ABK72891.1 ABK74466.1 ABK74466.1 pyrE pyrE ABK69806.1 ABK69806.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72135.1Conserved hypothetical protein. (300 aa)    
Predicted Functional Partners:
ABK70836.1
Spou rRNA methylase family protein; Identified by match to protein family HMM PF00588.
  
    0.896
ABK73697.1
Glycosyl hydrolase family protein 76; Identified by match to protein family HMM PF03663.
       0.875
ABK73856.1
Dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.850
ABK72891.1
Conserved hypothetical protein.
  
    0.792
ABK74466.1
Conserved hypothetical protein.
       0.732
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
    0.561
ABK69806.1
Putative transcriptional regulator; Identified by match to protein family HMM PF00440.
  
    0.451
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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