Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71920.1 | metZ | MSMEG_0768 | MSMEG_0769 | Conserved hypothetical protein. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.940 |
| ABK72109.1 | ABK72666.1 | MSMEG_1652 | MSMEG_6772 | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. | Homoserine O-acetyltransferase; Identified by match to protein family HMM PF00561; Belongs to the AB hydrolase superfamily. MetX family. | 0.985 |
| ABK72109.1 | ABK74127.1 | MSMEG_1652 | MSMEG_4527 | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. | Ferredoxin sulfite reductase; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.610 |
| ABK72109.1 | ABK74603.1 | MSMEG_1652 | MSMEG_6203 | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. | Cysteine synthase/cystathionine beta-synthase family protein; Identified by match to protein family HMM PF00291. | 0.833 |
| ABK72109.1 | ABK75142.1 | MSMEG_1652 | MSMEG_5270 | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. | Cystathionine beta-synthase; Identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137. | 0.954 |
| ABK72109.1 | ABK76067.1 | MSMEG_1652 | MSMEG_0239 | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. | O-acetylhomoserine/O-acetylserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM TIGR01326. | 0.906 |
| ABK72109.1 | metE | MSMEG_1652 | MSMEG_6638 | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.957 |
| ABK72109.1 | metH | MSMEG_1652 | MSMEG_4185 | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.953 |
| ABK72109.1 | metX | MSMEG_1652 | MSMEG_1651 | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. | Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. | 0.999 |
| ABK72109.1 | metZ | MSMEG_1652 | MSMEG_0769 | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.936 |
| ABK72666.1 | ABK72109.1 | MSMEG_6772 | MSMEG_1652 | Homoserine O-acetyltransferase; Identified by match to protein family HMM PF00561; Belongs to the AB hydrolase superfamily. MetX family. | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. | 0.985 |
| ABK72666.1 | ABK75142.1 | MSMEG_6772 | MSMEG_5270 | Homoserine O-acetyltransferase; Identified by match to protein family HMM PF00561; Belongs to the AB hydrolase superfamily. MetX family. | Cystathionine beta-synthase; Identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137. | 0.850 |
| ABK72666.1 | ABK76067.1 | MSMEG_6772 | MSMEG_0239 | Homoserine O-acetyltransferase; Identified by match to protein family HMM PF00561; Belongs to the AB hydrolase superfamily. MetX family. | O-acetylhomoserine/O-acetylserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM TIGR01326. | 0.974 |
| ABK72666.1 | metH | MSMEG_6772 | MSMEG_4185 | Homoserine O-acetyltransferase; Identified by match to protein family HMM PF00561; Belongs to the AB hydrolase superfamily. MetX family. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.707 |
| ABK72666.1 | metX | MSMEG_6772 | MSMEG_1651 | Homoserine O-acetyltransferase; Identified by match to protein family HMM PF00561; Belongs to the AB hydrolase superfamily. MetX family. | Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. | 0.934 |
| ABK72666.1 | metZ | MSMEG_6772 | MSMEG_0769 | Homoserine O-acetyltransferase; Identified by match to protein family HMM PF00561; Belongs to the AB hydrolase superfamily. MetX family. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.933 |
| ABK74127.1 | ABK72109.1 | MSMEG_4527 | MSMEG_1652 | Ferredoxin sulfite reductase; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. | 0.610 |
| ABK74127.1 | ABK74603.1 | MSMEG_4527 | MSMEG_6203 | Ferredoxin sulfite reductase; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Cysteine synthase/cystathionine beta-synthase family protein; Identified by match to protein family HMM PF00291. | 0.943 |
| ABK74127.1 | ABK75142.1 | MSMEG_4527 | MSMEG_5270 | Ferredoxin sulfite reductase; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Cystathionine beta-synthase; Identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137. | 0.659 |
| ABK74127.1 | ABK76067.1 | MSMEG_4527 | MSMEG_0239 | Ferredoxin sulfite reductase; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | O-acetylhomoserine/O-acetylserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM TIGR01326. | 0.515 |
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