Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69749.1 | ABK72864.1 | MSMEG_5055 | MSMEG_4710 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF03949. | Dihydrolipoamide acetyltransferase; Identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817. | 0.434 |
| ABK69749.1 | ABK76139.1 | MSMEG_5055 | MSMEG_4646 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF03949. | Pyruvate synthase; Identified by match to protein family HMM PF01855. | 0.950 |
| ABK69749.1 | glcB | MSMEG_5055 | MSMEG_3640 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF03949. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.928 |
| ABK69749.1 | orB | MSMEG_5055 | MSMEG_4645 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF03949. | Alpha oxoglutarate ferredoxin oxidoreductase, beta subunit; Identified by match to protein family HMM PF02775. | 0.926 |
| ABK69749.1 | pta | MSMEG_5055 | MSMEG_0783 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF03949. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.953 |
| ABK70948.1 | ABK72864.1 | MSMEG_0718 | MSMEG_4710 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | Dihydrolipoamide acetyltransferase; Identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817. | 0.921 |
| ABK70948.1 | ABK76139.1 | MSMEG_0718 | MSMEG_4646 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | Pyruvate synthase; Identified by match to protein family HMM PF01855. | 0.940 |
| ABK70948.1 | PrpE | MSMEG_0718 | MSMEG_5404 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | propionate--CoA ligase; Identified by match to protein family HMM PF00501. | 0.939 |
| ABK70948.1 | ackA | MSMEG_0718 | MSMEG_0784 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.975 |
| ABK70948.1 | acsA | MSMEG_0718 | MSMEG_6179 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.932 |
| ABK70948.1 | glcB | MSMEG_0718 | MSMEG_3640 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.952 |
| ABK70948.1 | orB | MSMEG_0718 | MSMEG_4645 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | Alpha oxoglutarate ferredoxin oxidoreductase, beta subunit; Identified by match to protein family HMM PF02775. | 0.916 |
| ABK70948.1 | pta | MSMEG_0718 | MSMEG_0783 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.964 |
| ABK72864.1 | ABK69749.1 | MSMEG_4710 | MSMEG_5055 | Dihydrolipoamide acetyltransferase; Identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817. | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF03949. | 0.434 |
| ABK72864.1 | ABK70948.1 | MSMEG_4710 | MSMEG_0718 | Dihydrolipoamide acetyltransferase; Identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817. | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.921 |
| ABK72864.1 | ABK76139.1 | MSMEG_4710 | MSMEG_4646 | Dihydrolipoamide acetyltransferase; Identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817. | Pyruvate synthase; Identified by match to protein family HMM PF01855. | 0.931 |
| ABK72864.1 | acsA | MSMEG_4710 | MSMEG_6179 | Dihydrolipoamide acetyltransferase; Identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.915 |
| ABK72864.1 | glcB | MSMEG_4710 | MSMEG_3640 | Dihydrolipoamide acetyltransferase; Identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.915 |
| ABK72864.1 | orB | MSMEG_4710 | MSMEG_4645 | Dihydrolipoamide acetyltransferase; Identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817. | Alpha oxoglutarate ferredoxin oxidoreductase, beta subunit; Identified by match to protein family HMM PF02775. | 0.917 |
| ABK72864.1 | pta | MSMEG_4710 | MSMEG_0783 | Dihydrolipoamide acetyltransferase; Identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.958 |
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