Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK73057.1 | thiD | MSMEG_0464 | MSMEG_0825 | Phosphomethylpyrimidine kinase. | Phosphomethylpyrimidine kinase; Identified by match to protein family HMM TIGR00097. | 0.626 |
| ABK73057.1 | thiE | MSMEG_0464 | MSMEG_0789 | Phosphomethylpyrimidine kinase. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.975 |
| ABK73057.1 | thiG | MSMEG_0464 | MSMEG_0793 | Phosphomethylpyrimidine kinase. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.885 |
| ABK73057.1 | thiL | MSMEG_0464 | MSMEG_2398 | Phosphomethylpyrimidine kinase. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.462 |
| ABK73057.1 | thiO | MSMEG_0464 | MSMEG_0791 | Phosphomethylpyrimidine kinase. | Glycine oxidase ThiO; Identified by match to protein family HMM PF01266; match to protein family HMM TIGR02352. | 0.635 |
| ABK73057.1 | thiS | MSMEG_0464 | MSMEG_0792 | Phosphomethylpyrimidine kinase. | Thiamine biosynthesis protein ThiS; Identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683. | 0.719 |
| ABK73379.1 | ABK74364.1 | MSMEG_0794 | MSMEG_0795 | Conserved hypothetical protein. | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.773 |
| ABK73379.1 | ABK75055.1 | MSMEG_0794 | MSMEG_0796 | Conserved hypothetical protein. | ABC transporter integral membrane subunit. | 0.769 |
| ABK73379.1 | thiE | MSMEG_0794 | MSMEG_0789 | Conserved hypothetical protein. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.621 |
| ABK73379.1 | thiG | MSMEG_0794 | MSMEG_0793 | Conserved hypothetical protein. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.786 |
| ABK73379.1 | thiO | MSMEG_0794 | MSMEG_0791 | Conserved hypothetical protein. | Glycine oxidase ThiO; Identified by match to protein family HMM PF01266; match to protein family HMM TIGR02352. | 0.785 |
| ABK73379.1 | thiS | MSMEG_0794 | MSMEG_0792 | Conserved hypothetical protein. | Thiamine biosynthesis protein ThiS; Identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683. | 0.785 |
| ABK74364.1 | ABK73379.1 | MSMEG_0795 | MSMEG_0794 | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. | Conserved hypothetical protein. | 0.773 |
| ABK74364.1 | ABK75055.1 | MSMEG_0795 | MSMEG_0796 | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter integral membrane subunit. | 0.940 |
| ABK74364.1 | thiE | MSMEG_0795 | MSMEG_0789 | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.568 |
| ABK74364.1 | thiG | MSMEG_0795 | MSMEG_0793 | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.723 |
| ABK74364.1 | thiO | MSMEG_0795 | MSMEG_0791 | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. | Glycine oxidase ThiO; Identified by match to protein family HMM PF01266; match to protein family HMM TIGR02352. | 0.731 |
| ABK74364.1 | thiS | MSMEG_0795 | MSMEG_0792 | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. | Thiamine biosynthesis protein ThiS; Identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683. | 0.722 |
| ABK75055.1 | ABK73379.1 | MSMEG_0796 | MSMEG_0794 | ABC transporter integral membrane subunit. | Conserved hypothetical protein. | 0.769 |
| ABK75055.1 | ABK74364.1 | MSMEG_0796 | MSMEG_0795 | ABC transporter integral membrane subunit. | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.940 |
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