Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69605.1 | ABK69772.1 | MSMEG_0808 | MSMEG_0809 | Possible chalcone synthase Pks10; Identified by match to protein family HMM PF00195; match to protein family HMM PF02797. | Isoprenylcysteine carboxyl methyltransferase; Identified by match to protein family HMM PF04140. | 0.997 |
| ABK69605.1 | ABK70452.1 | MSMEG_0808 | MSMEG_1196 | Possible chalcone synthase Pks10; Identified by match to protein family HMM PF00195; match to protein family HMM PF02797. | SNF2 domain protein; Identified by match to protein family HMM PF00176. | 0.724 |
| ABK69605.1 | ABK73456.1 | MSMEG_0808 | MSMEG_2035 | Possible chalcone synthase Pks10; Identified by match to protein family HMM PF00195; match to protein family HMM PF02797. | Amine oxidase [flavin-containing] B; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593. | 0.753 |
| ABK69605.1 | ABK74117.1 | MSMEG_0808 | MSMEG_0805 | Possible chalcone synthase Pks10; Identified by match to protein family HMM PF00195; match to protein family HMM PF02797. | Conserved hypothetical protein. | 0.858 |
| ABK69605.1 | ABK74575.1 | MSMEG_0808 | MSMEG_0811 | Possible chalcone synthase Pks10; Identified by match to protein family HMM PF00195; match to protein family HMM PF02797. | Oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.996 |
| ABK69605.1 | ABK75667.1 | MSMEG_0808 | MSMEG_5385 | Possible chalcone synthase Pks10; Identified by match to protein family HMM PF00195; match to protein family HMM PF02797. | Identified by match to protein family HMM PF00581; match to protein family HMM PF00753. | 0.757 |
| ABK69605.1 | atpE | MSMEG_0808 | MSMEG_4941 | Possible chalcone synthase Pks10; Identified by match to protein family HMM PF00195; match to protein family HMM PF02797. | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.805 |
| ABK69605.1 | rpoA | MSMEG_0808 | MSMEG_1524 | Possible chalcone synthase Pks10; Identified by match to protein family HMM PF00195; match to protein family HMM PF02797. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.818 |
| ABK69605.1 | rpoB | MSMEG_0808 | MSMEG_1367 | Possible chalcone synthase Pks10; Identified by match to protein family HMM PF00195; match to protein family HMM PF02797. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. This subunit often mutates to generate rifampicin (Rif) resistance. Interaction with RbpA partially restores Rif-inhibited transcription; once the subunit is Rif-resistant however RbpA no longer stimulates transcription. | 0.881 |
| ABK69605.1 | rpoZ | MSMEG_0808 | MSMEG_3053 | Possible chalcone synthase Pks10; Identified by match to protein family HMM PF00195; match to protein family HMM PF02797. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.835 |
| ABK69772.1 | ABK69605.1 | MSMEG_0809 | MSMEG_0808 | Isoprenylcysteine carboxyl methyltransferase; Identified by match to protein family HMM PF04140. | Possible chalcone synthase Pks10; Identified by match to protein family HMM PF00195; match to protein family HMM PF02797. | 0.997 |
| ABK69772.1 | ABK74117.1 | MSMEG_0809 | MSMEG_0805 | Isoprenylcysteine carboxyl methyltransferase; Identified by match to protein family HMM PF04140. | Conserved hypothetical protein. | 0.575 |
| ABK69772.1 | ABK74575.1 | MSMEG_0809 | MSMEG_0811 | Isoprenylcysteine carboxyl methyltransferase; Identified by match to protein family HMM PF04140. | Oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.996 |
| ABK70452.1 | ABK69605.1 | MSMEG_1196 | MSMEG_0808 | SNF2 domain protein; Identified by match to protein family HMM PF00176. | Possible chalcone synthase Pks10; Identified by match to protein family HMM PF00195; match to protein family HMM PF02797. | 0.724 |
| ABK70452.1 | ABK73456.1 | MSMEG_1196 | MSMEG_2035 | SNF2 domain protein; Identified by match to protein family HMM PF00176. | Amine oxidase [flavin-containing] B; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593. | 0.875 |
| ABK70452.1 | ABK74117.1 | MSMEG_1196 | MSMEG_0805 | SNF2 domain protein; Identified by match to protein family HMM PF00176. | Conserved hypothetical protein. | 0.713 |
| ABK70452.1 | rpoA | MSMEG_1196 | MSMEG_1524 | SNF2 domain protein; Identified by match to protein family HMM PF00176. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.976 |
| ABK70452.1 | rpoB | MSMEG_1196 | MSMEG_1367 | SNF2 domain protein; Identified by match to protein family HMM PF00176. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. This subunit often mutates to generate rifampicin (Rif) resistance. Interaction with RbpA partially restores Rif-inhibited transcription; once the subunit is Rif-resistant however RbpA no longer stimulates transcription. | 0.975 |
| ABK70452.1 | rpoZ | MSMEG_1196 | MSMEG_3053 | SNF2 domain protein; Identified by match to protein family HMM PF00176. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.977 |
| ABK73456.1 | ABK69605.1 | MSMEG_2035 | MSMEG_0808 | Amine oxidase [flavin-containing] B; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593. | Possible chalcone synthase Pks10; Identified by match to protein family HMM PF00195; match to protein family HMM PF02797. | 0.753 |
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