STRINGSTRING
ABK74575.1 ABK74575.1 ABK69605.1 ABK69605.1 ABK69772.1 ABK69772.1 arsB arsB ABK74419.1 ABK74419.1 ABK70886.1 ABK70886.1 ABK70355.1 ABK70355.1 ABK74117.1 ABK74117.1 etfB etfB etfA etfA ABK72276.1 ABK72276.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74575.1Oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. (342 aa)    
Predicted Functional Partners:
ABK69605.1
Possible chalcone synthase Pks10; Identified by match to protein family HMM PF00195; match to protein family HMM PF02797.
 
  
 0.996
ABK69772.1
Isoprenylcysteine carboxyl methyltransferase; Identified by match to protein family HMM PF04140.
 
  
 0.996
arsB
Identified by match to protein family HMM PF01758; match to protein family HMM TIGR00832.
  
  
 0.818
ABK74419.1
Conserved hypothetical protein.
   
  
 0.684
ABK70886.1
Leupeptin-inactivating enzyme 1; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389.
  
    0.631
ABK70355.1
Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389.
  
    0.616
ABK74117.1
Conserved hypothetical protein.
  
    0.591
etfB
Electron transfer flavoprotein, beta subunit; Identified by similarity to SP:O85691; match to protein family HMM PF01012.
  
 
 0.563
etfA
Electron transfer flavoprotein, alpha subunit; Identified by similarity to SP:P38974; match to protein family HMM PF00766; match to protein family HMM PF01012.
  
 
 0.532
ABK72276.1
Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728.
  
  
 0.495
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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