Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70027.1 | ABK71652.1 | MSMEG_0812 | MSMEG_0815 | Amino acid transporter; Identified by match to protein family HMM PF00324; match to protein family HMM PF01490. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.554 |
ABK70027.1 | ABK73267.1 | MSMEG_0812 | MSMEG_0810 | Amino acid transporter; Identified by match to protein family HMM PF00324; match to protein family HMM PF01490. | Putative pyrimidine permease RutG; Identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801. | 0.659 |
ABK70027.1 | ABK74937.1 | MSMEG_0812 | MSMEG_0813 | Amino acid transporter; Identified by match to protein family HMM PF00324; match to protein family HMM PF01490. | Conserved hypothetical protein. | 0.750 |
ABK71652.1 | ABK70027.1 | MSMEG_0815 | MSMEG_0812 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Amino acid transporter; Identified by match to protein family HMM PF00324; match to protein family HMM PF01490. | 0.554 |
ABK71652.1 | ABK73267.1 | MSMEG_0815 | MSMEG_0810 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Putative pyrimidine permease RutG; Identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801. | 0.455 |
ABK71652.1 | ABK74937.1 | MSMEG_0815 | MSMEG_0813 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.636 |
ABK73267.1 | ABK70027.1 | MSMEG_0810 | MSMEG_0812 | Putative pyrimidine permease RutG; Identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801. | Amino acid transporter; Identified by match to protein family HMM PF00324; match to protein family HMM PF01490. | 0.659 |
ABK73267.1 | ABK71652.1 | MSMEG_0810 | MSMEG_0815 | Putative pyrimidine permease RutG; Identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.455 |
ABK73267.1 | ABK74937.1 | MSMEG_0810 | MSMEG_0813 | Putative pyrimidine permease RutG; Identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801. | Conserved hypothetical protein. | 0.612 |
ABK74937.1 | ABK70027.1 | MSMEG_0813 | MSMEG_0812 | Conserved hypothetical protein. | Amino acid transporter; Identified by match to protein family HMM PF00324; match to protein family HMM PF01490. | 0.750 |
ABK74937.1 | ABK71652.1 | MSMEG_0813 | MSMEG_0815 | Conserved hypothetical protein. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.636 |
ABK74937.1 | ABK73267.1 | MSMEG_0813 | MSMEG_0810 | Conserved hypothetical protein. | Putative pyrimidine permease RutG; Identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801. | 0.612 |