Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69756.1 | ABK76156.1 | MSMEG_1595 | MSMEG_0821 | Putative oxidoreductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF07993; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425. | 0.475 |
| ABK69792.1 | ABK70414.1 | MSMEG_0818 | MSMEG_0817 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.529 |
| ABK69792.1 | ABK74148.1 | MSMEG_0818 | MSMEG_0819 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879. | 0.697 |
| ABK69792.1 | ABK76156.1 | MSMEG_0818 | MSMEG_0821 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425. | 0.682 |
| ABK70414.1 | ABK69792.1 | MSMEG_0817 | MSMEG_0818 | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.529 |
| ABK70414.1 | ABK74148.1 | MSMEG_0817 | MSMEG_0819 | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879. | 0.534 |
| ABK70414.1 | ABK76156.1 | MSMEG_0817 | MSMEG_0821 | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425. | 0.535 |
| ABK73521.1 | ABK76156.1 | MSMEG_5711 | MSMEG_0821 | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425. | 0.475 |
| ABK74148.1 | ABK69792.1 | MSMEG_0819 | MSMEG_0818 | N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.697 |
| ABK74148.1 | ABK70414.1 | MSMEG_0819 | MSMEG_0817 | N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879. | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.534 |
| ABK74148.1 | ABK76156.1 | MSMEG_0819 | MSMEG_0821 | N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879. | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425. | 0.840 |
| ABK76156.1 | ABK69756.1 | MSMEG_0821 | MSMEG_1595 | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425. | Putative oxidoreductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF07993; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.475 |
| ABK76156.1 | ABK69792.1 | MSMEG_0821 | MSMEG_0818 | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.682 |
| ABK76156.1 | ABK70414.1 | MSMEG_0821 | MSMEG_0817 | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425. | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.535 |
| ABK76156.1 | ABK73521.1 | MSMEG_0821 | MSMEG_5711 | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.475 |
| ABK76156.1 | ABK74148.1 | MSMEG_0821 | MSMEG_0819 | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425. | N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879. | 0.840 |
| ABK76156.1 | aspS | MSMEG_0821 | MSMEG_3003 | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.647 |
| ABK76156.1 | gatB | MSMEG_0821 | MSMEG_2367 | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.925 |
| ABK76156.1 | gatC | MSMEG_0821 | MSMEG_2364 | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425. | glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.844 |
| ABK76156.1 | gltX-2 | MSMEG_0821 | MSMEG_6306 | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425. | glutamyl-tRNA synthetase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily. | 0.526 |
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