STRINGSTRING
ABK72413.1 ABK72413.1 ABK72419.1 ABK72419.1 ABK70103.1 ABK70103.1 ABK71682.1 ABK71682.1 ABK69836.1 ABK69836.1 ABK69634.1 ABK69634.1 FabG-2 FabG-2 ABK70709.1 ABK70709.1 ABK71817.1 ABK71817.1 ABK75247.1 ABK75247.1 xth xth
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72413.1Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. (238 aa)    
Predicted Functional Partners:
ABK72419.1
Putative oxidoreductase YqjQ; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.769
ABK70103.1
Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.
  
 0.742
ABK71682.1
Short chain dehydrogenase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.702
ABK69836.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106.
  
    0.663
ABK69634.1
Dehydrogenase; Identified by match to protein family HMM PF00106.
  
    0.660
FabG-2
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.655
ABK70709.1
Carveol dehydrogenase; Identified by match to protein family HMM PF00106.
  
    0.627
ABK71817.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.598
ABK75247.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106.
 
 
 0.598
xth
Exodeoxyribonuclease III; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633.
   
 
 0.586
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (22%) [HD]