Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70263.1 | ABK70524.1 | MSMEG_3060 | MSMEG_3404 | Conserved hypothetical protein; Identified by match to protein family HMM PF07947. | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | 0.730 |
ABK70263.1 | ABK70536.1 | MSMEG_3060 | MSMEG_0141 | Conserved hypothetical protein; Identified by match to protein family HMM PF07947. | Probable conserved mce associated transmembrane protein; Identified by match to protein family HMM PF06271. | 0.592 |
ABK70263.1 | ABK71907.1 | MSMEG_3060 | MSMEG_3578 | Conserved hypothetical protein; Identified by match to protein family HMM PF07947. | Putative cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00672. | 0.518 |
ABK70263.1 | ABK72735.1 | MSMEG_3060 | MSMEG_2739 | Conserved hypothetical protein; Identified by match to protein family HMM PF07947. | Conserved hypothetical protein. | 0.683 |
ABK70263.1 | ABK73863.1 | MSMEG_3060 | MSMEG_0882 | Conserved hypothetical protein; Identified by match to protein family HMM PF07947. | Conserved hypothetical protein. | 0.527 |
ABK70263.1 | ABK76032.1 | MSMEG_3060 | MSMEG_1195 | Conserved hypothetical protein; Identified by match to protein family HMM PF07947. | Conserved hypothetical protein. | 0.576 |
ABK70263.1 | ABK76106.1 | MSMEG_3060 | MSMEG_3579 | Conserved hypothetical protein; Identified by match to protein family HMM PF07947. | Probable conserved transmembrane protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF00924. | 0.616 |
ABK70524.1 | ABK70263.1 | MSMEG_3404 | MSMEG_3060 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Conserved hypothetical protein; Identified by match to protein family HMM PF07947. | 0.730 |
ABK70524.1 | ABK70536.1 | MSMEG_3404 | MSMEG_0141 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Probable conserved mce associated transmembrane protein; Identified by match to protein family HMM PF06271. | 0.600 |
ABK70524.1 | ABK71907.1 | MSMEG_3404 | MSMEG_3578 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Putative cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00672. | 0.569 |
ABK70524.1 | ABK72735.1 | MSMEG_3404 | MSMEG_2739 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Conserved hypothetical protein. | 0.727 |
ABK70524.1 | ABK73863.1 | MSMEG_3404 | MSMEG_0882 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Conserved hypothetical protein. | 0.717 |
ABK70524.1 | ABK75366.1 | MSMEG_3404 | MSMEG_5054 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Lipoprotein LpqZ; Identified by match to protein family HMM PF04069. | 0.448 |
ABK70524.1 | ABK76032.1 | MSMEG_3404 | MSMEG_1195 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Conserved hypothetical protein. | 0.438 |
ABK70524.1 | ABK76106.1 | MSMEG_3404 | MSMEG_3579 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Probable conserved transmembrane protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF00924. | 0.688 |
ABK70536.1 | ABK70263.1 | MSMEG_0141 | MSMEG_3060 | Probable conserved mce associated transmembrane protein; Identified by match to protein family HMM PF06271. | Conserved hypothetical protein; Identified by match to protein family HMM PF07947. | 0.592 |
ABK70536.1 | ABK70524.1 | MSMEG_0141 | MSMEG_3404 | Probable conserved mce associated transmembrane protein; Identified by match to protein family HMM PF06271. | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | 0.600 |
ABK70536.1 | ABK71907.1 | MSMEG_0141 | MSMEG_3578 | Probable conserved mce associated transmembrane protein; Identified by match to protein family HMM PF06271. | Putative cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00672. | 0.522 |
ABK70536.1 | ABK72735.1 | MSMEG_0141 | MSMEG_2739 | Probable conserved mce associated transmembrane protein; Identified by match to protein family HMM PF06271. | Conserved hypothetical protein. | 0.726 |
ABK70536.1 | ABK73863.1 | MSMEG_0141 | MSMEG_0882 | Probable conserved mce associated transmembrane protein; Identified by match to protein family HMM PF06271. | Conserved hypothetical protein. | 0.528 |
page 1 of 4