STRINGSTRING
ABK73863.1 ABK73863.1 ABK74590.1 ABK74590.1 ABK70524.1 ABK70524.1 ABK76106.1 ABK76106.1 ABK71907.1 ABK71907.1 ABK72735.1 ABK72735.1 ABK73957.1 ABK73957.1 ABK75366.1 ABK75366.1 ABK76032.1 ABK76032.1 ABK70536.1 ABK70536.1 ABK70263.1 ABK70263.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73863.1Conserved hypothetical protein. (127 aa)    
Predicted Functional Partners:
ABK74590.1
Identified by match to protein family HMM PF07908; match to protein family HMM PF07969.
 
    0.744
ABK70524.1
HNH endonuclease domain protein; Identified by match to protein family HMM PF01844.
  
     0.717
ABK76106.1
Probable conserved transmembrane protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF00924.
  
     0.706
ABK71907.1
Putative cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00672.
  
     0.667
ABK72735.1
Conserved hypothetical protein.
  
    0.596
ABK73957.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04607.
  
     0.545
ABK75366.1
Lipoprotein LpqZ; Identified by match to protein family HMM PF04069.
  
     0.543
ABK76032.1
Conserved hypothetical protein.
  
    0.534
ABK70536.1
Probable conserved mce associated transmembrane protein; Identified by match to protein family HMM PF06271.
  
    0.528
ABK70263.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07947.
  
    0.527
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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