STRINGSTRING
ABK75287.1 ABK75287.1 ABK71590.1 ABK71590.1 ABK75156.1 ABK75156.1 ABK74123.1 ABK74123.1 ABK74780.1 ABK74780.1 ABK74068.1 ABK74068.1 ABK72167.1 ABK72167.1 ABK69897.1 ABK69897.1 ABK73089.1 ABK73089.1 ABK75212.1 ABK75212.1 ABK75964.1 ABK75964.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK75287.1Bacterial regulatory protein, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. (247 aa)    
Predicted Functional Partners:
ABK71590.1
Transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.770
ABK75156.1
GntR family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.755
ABK74123.1
Transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
  
    0.747
ABK74780.1
Probable transcriptional regulator YdhC; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.740
ABK74068.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.739
ABK72167.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.737
ABK69897.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.735
ABK73089.1
GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.730
ABK75212.1
Transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.729
ABK75964.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.728
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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