Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69870.1 | ABK73795.1 | MSMEG_0234 | MSMEG_0899 | Metallopeptidase; Identified by match to protein family HMM PF01431; match to protein family HMM PF05649. | Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. | 0.558 |
ABK70917.1 | ABK72432.1 | MSMEG_0901 | MSMEG_0900 | Conserved hypothetical protein; Identified by match to protein family HMM PF05610. | Eptc-inducible aldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.971 |
ABK70917.1 | ABK73795.1 | MSMEG_0901 | MSMEG_0899 | Conserved hypothetical protein; Identified by match to protein family HMM PF05610. | Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. | 0.539 |
ABK72432.1 | ABK70917.1 | MSMEG_0900 | MSMEG_0901 | Eptc-inducible aldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Conserved hypothetical protein; Identified by match to protein family HMM PF05610. | 0.971 |
ABK72432.1 | ABK73795.1 | MSMEG_0900 | MSMEG_0899 | Eptc-inducible aldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. | 0.639 |
ABK72655.1 | ABK73795.1 | MSMEG_5839 | MSMEG_0899 | Protease 2; Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. | Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. | 0.434 |
ABK73795.1 | ABK69870.1 | MSMEG_0899 | MSMEG_0234 | Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. | Metallopeptidase; Identified by match to protein family HMM PF01431; match to protein family HMM PF05649. | 0.558 |
ABK73795.1 | ABK70917.1 | MSMEG_0899 | MSMEG_0901 | Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. | Conserved hypothetical protein; Identified by match to protein family HMM PF05610. | 0.539 |
ABK73795.1 | ABK72432.1 | MSMEG_0899 | MSMEG_0900 | Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. | Eptc-inducible aldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.639 |
ABK73795.1 | ABK72655.1 | MSMEG_0899 | MSMEG_5839 | Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. | Protease 2; Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. | 0.434 |
ABK73795.1 | ABK75475.1 | MSMEG_0899 | MSMEG_4633 | Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. | Peptidase S9, prolyl oligopeptidase; Identified by match to protein family HMM PF00326; match to protein family HMM PF05448. | 0.484 |
ABK75475.1 | ABK73795.1 | MSMEG_4633 | MSMEG_0899 | Peptidase S9, prolyl oligopeptidase; Identified by match to protein family HMM PF00326; match to protein family HMM PF05448. | Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. | 0.484 |