Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70827.1 | ABK72121.1 | MSMEG_0906 | MSMEG_0908 | Identified by match to protein family HMM PF01381; match to protein family HMM PF06114. | Hypothetical protein; Identified by Glimmer2; putative. | 0.559 |
ABK70827.1 | ABK74560.1 | MSMEG_0906 | MSMEG_0909 | Identified by match to protein family HMM PF01381; match to protein family HMM PF06114. | acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643. | 0.475 |
ABK70827.1 | ABK75938.1 | MSMEG_0906 | MSMEG_0907 | Identified by match to protein family HMM PF01381; match to protein family HMM PF06114. | Conserved hypothetical protein. | 0.564 |
ABK70827.1 | pcaC | MSMEG_0906 | MSMEG_0905 | Identified by match to protein family HMM PF01381; match to protein family HMM PF06114. | 4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627. | 0.857 |
ABK72121.1 | ABK70827.1 | MSMEG_0908 | MSMEG_0906 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF01381; match to protein family HMM PF06114. | 0.559 |
ABK72121.1 | ABK74560.1 | MSMEG_0908 | MSMEG_0909 | Hypothetical protein; Identified by Glimmer2; putative. | acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643. | 0.529 |
ABK72121.1 | ABK75938.1 | MSMEG_0908 | MSMEG_0907 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.777 |
ABK72121.1 | pcaC | MSMEG_0908 | MSMEG_0905 | Hypothetical protein; Identified by Glimmer2; putative. | 4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627. | 0.505 |
ABK74560.1 | ABK70827.1 | MSMEG_0909 | MSMEG_0906 | acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643. | Identified by match to protein family HMM PF01381; match to protein family HMM PF06114. | 0.475 |
ABK74560.1 | ABK72121.1 | MSMEG_0909 | MSMEG_0908 | acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643. | Hypothetical protein; Identified by Glimmer2; putative. | 0.529 |
ABK74560.1 | ABK75938.1 | MSMEG_0909 | MSMEG_0907 | acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643. | Conserved hypothetical protein. | 0.569 |
ABK74560.1 | pcaC | MSMEG_0909 | MSMEG_0905 | acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643. | 4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627. | 0.530 |
ABK75938.1 | ABK70827.1 | MSMEG_0907 | MSMEG_0906 | Conserved hypothetical protein. | Identified by match to protein family HMM PF01381; match to protein family HMM PF06114. | 0.564 |
ABK75938.1 | ABK72121.1 | MSMEG_0907 | MSMEG_0908 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.777 |
ABK75938.1 | ABK74560.1 | MSMEG_0907 | MSMEG_0909 | Conserved hypothetical protein. | acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643. | 0.569 |
ABK75938.1 | pcaC | MSMEG_0907 | MSMEG_0905 | Conserved hypothetical protein. | 4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627. | 0.543 |
pcaC | ABK70827.1 | MSMEG_0905 | MSMEG_0906 | 4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627. | Identified by match to protein family HMM PF01381; match to protein family HMM PF06114. | 0.857 |
pcaC | ABK72121.1 | MSMEG_0905 | MSMEG_0908 | 4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627. | Hypothetical protein; Identified by Glimmer2; putative. | 0.505 |
pcaC | ABK74560.1 | MSMEG_0905 | MSMEG_0909 | 4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627. | acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643. | 0.530 |
pcaC | ABK75938.1 | MSMEG_0905 | MSMEG_0907 | 4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627. | Conserved hypothetical protein. | 0.543 |